Shewanella benthica: SHEWBE_3752
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Entry
SHEWBE_3752 CDS
T06707
Symbol
ygeV
Name
(GenBank) putative DNA-binding transcriptional regulator
Organism
sbk
Shewanella benthica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_16
HTH_50
AAA_7
PAS_7
PAS
AAA_3
AAA_19
HTH_7
MCM
PAS_8
HTH_28
PE-PGRS_C
RseC_MucC
Motif
Other DBs
NCBI-ProteinID:
SQH77715
UniProt:
A0A330M6X9
LinkDB
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Position
SHEWBE:3618280..3620052
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AA seq
590 aa
AA seq
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MIDDKNHKITLLNTAYTSELMKLQPTILEFTQKLSAVLQLDAEVVDANLVRIAGTGPYNK
FIGKKLNTSSRIFRYIIETKNNKVVVKTRTDPICEGCTTRDSCEETAFLGVPIMLNESCI
GVISLVAFNQKSRELIKSNTQLFLDYIQHISQIFVLKVSESKKSSSGLDDVFSSLINNMD
QGVLVLDDSNRVLHGNAPALANLNITQTELTNIEINIQPLLVHDNKLKGPEQHIITLGKR
QELVVGQFHVIKSQQLFLMSFYQPQNAISHDDTSIDLFKDIIGESSQIVQLKTLITRVAR
SPSSILIDGETGTGKEVFAKAIHAHSDRNKESFIAINCAAIPEQLLESELFGYVKGAFTG
ALTKGRIGLIQAANNGTLFLDEIGDMSMTLQSKLLRVLEEREVMPIGSNSPVPVNIRIIS
ATNRNFKEMIAQNDFREDLYYRLNVIPMHLPALRERKGDIEHLIYHFLERHSHAIGAYYP
GITPSVINSLNAYHWPGNIRELSNLIEYLVNIVPVGDQIDVDLLPPYFDNQVEVNETKTS
VKDDHLNLEEIEKIKIEECISRLGNRKLVAKELGIGVATLYRKIKKYQLP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgacaaaaaccataagatcacactattgaatactgcatatacctctgagctg
atgaaacttcagcccaccatattagaattcacccagaagttatccgccgtgttgcaactc
gatgcggaagtggttgatgccaatttagtacgtatcgcaggtactgggccttacaataaa
ttcatcggcaagaaactaaataccagctcgagaattttcagatatattatagaaaccaaa
aataataaggtggtggtaaagactcgcaccgatcctatatgtgaaggctgcacaactcgg
gacagctgtgaggaaaccgcttttcttggtgtgccgatcatgctcaatgaatcctgtatc
ggtgtgatcagtttagtggcatttaatcaaaaatcacgggaattaattaagagtaatact
caattatttctcgattacattcagcatatttcacagatttttgttctaaaggtgtctgaa
tctaagaagagcagttccgggctagacgatgttttttccagcttaataaataatatggat
caaggggtactggttctcgatgacagcaatcgggttttacatggcaacgccccagcttta
gccaacctgaatatcacccaaacggaactgacgaatatcgagatcaatattcagcctttg
ctggtgcatgacaataaactaaaaggacccgagcaacatattattaccttgggcaagcgt
caggagctcgtggtaggacagtttcatgtcatcaagagtcagcagctgtttttaatgtct
ttttaccagccccagaacgcgatctcccacgatgatacttcgatagatttattcaaagat
atcataggagaatccagccaaatagttcagttaaaaaccttaattacccgcgtcgccagg
agcccatcgagtatcttgatagatggcgagactggcacaggtaaagaggtctttgctaag
gctattcacgcccatagtgatcgtaataaagaaagttttattgccattaactgtgccgcc
atcccggagcaactgcttgagagtgagctatttggctatgttaaaggcgcttttaccgga
gccctgaccaaaggtcgaatcgggttaattcaggcggcgaataatggcaccctgttcctc
gatgagatcggcgatatgtcgatgacacttcagtctaagctgctgcgagtgctggaagag
cgcgaagtgatgcccataggttctaacagcccagtgccggtcaatattcgtattatttct
gcgaccaatcgtaatttcaaagagatgatcgcccagaatgacttccgggaagatctctac
tatcgcctcaatgtgatcccgatgcatctgcctgcattgagagagcgaaaaggcgatatc
gaacacttaatctatcacttcctagagcgtcactctcacgccataggtgcctactatccg
gggatcaccccgtcggtgattaacagcctgaatgcctaccactggccggggaatattcgt
gaactgagtaatcttatcgagtatctggtcaatatcgtgccagttggcgatcagatcgat
gtcgacctgctgcccccctactttgataatcaggtcgaggtgaatgaaaccaagaccagc
gtcaaagatgaccatttgaatcttgaagagatagagaagataaaaatagaggaatgcatc
tccagactaggcaaccgtaaactcgtggcaaaggagctaggaataggggttgccactctc
tatcgcaagattaagaagtaccaactgccttaa
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