Shewanella baltica OS155: Sbal_3668
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Entry
Sbal_3668 CDS
T00478
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
sbl
Shewanella baltica OS155
Pathway
sbl02020
Two-component system
sbl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sbal_3668
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sbal_3668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbl03021
]
Sbal_3668
Transcription machinery [BR:
sbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sbal_3668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DksA-like_N
Motif
Other DBs
NCBI-ProteinID:
ABN63143
UniProt:
A3D8T0
LinkDB
All DBs
Position
4287885..4289363
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AA seq
492 aa
AA seq
DB search
MKASLQLKLGQQLTMTPQLQQAIRLLQLSSLELQQEIQQALDSNPLLELEEDQFDATKDP
VNQTLSDTDFSESSPLPPEKDSSTIDTAESLTKESMPDELPMDTTWDEVFTASPNSGPGG
SREDDMPFQGETSEGLYEHLEWQKNLTPFSETDLAIATAIIDAIDDQGYLTQSTDEILEA
MGNSEVELDEVEAVLKRIQHFDPIGVAARDLSECLLIQLSHFAADTPNLENARMLIKDHL
DLIAARDFRLLMRKTKLKEDELRDGIALIQTLNPRPGLLITPNDDEYVIPDVSVSKKNGR
WVVELNPDCMPKINVNQHYASMARSTKSQADSQFIRGHLQEAKWFIKSLESRNDTLLKVA
NCIVQYQQGFFEYGEEAMKPMVLNDIAEAVEMHESTISRVTTQKYMHTPKGLFELKYFFS
SHVGTDDGGECSSTAIRAFIKKLVAAENQKKPLSDSKMAQLLAEQGINVARRTIAKYREA
MLIPPSNQRKSL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtcactccagctcaaactgggtcaacagttaaccatgacgccacaattacaa
caggccatacgtctgttgcaactgtcgtcattagaactgcagcaagagatccagcaagcc
ttagattctaatccccttcttgagctggaagaggatcaattcgacgccactaaagaccct
gtaaaccaaacgctatccgatacggatttcagtgaatctagccccctgccgccagaaaaa
gacagctccaccatagacacggcagagtcgctcacgaaagagtccatgcccgacgaactc
cccatggacaccacatgggatgaagtgttcaccgcctctcctaattctggccccggcggc
agtcgtgaagacgatatgcccttccaaggtgagaccagtgaaggcttgtatgaacactta
gaatggcaaaaaaacctcacaccgttttctgaaaccgatttagccattgccaccgccatt
attgatgccatcgacgatcaaggctatctcacccaaagcactgacgaaatcctcgaagcc
atgggcaattctgaggttgagctcgacgaagtcgaagccgtactcaagcgcattcaacat
tttgatcccattggtgttgccgcccgcgatttaagcgagtgcctgttgatccaactgtcg
catttcgccgctgacacgcccaacctagaaaacgcccgcatgctgatcaaagatcattta
gatctgatcgccgcccgcgattttagattgttgatgcgtaagactaaattaaaagaggat
gaattaagagacggcatcgcgcttatccaaaccctcaatccccgcccaggtttattgatt
acgcccaacgatgacgaatacgtcatcccagatgtgtcagtgtcgaagaaaaatggccgc
tgggtggttgagctgaatcctgactgcatgccaaaaatcaatgtaaatcaacattatgct
tcgatggcgcgcagcactaaaagccaagccgatagccaatttattcgtggccatctgcaa
gaggctaaatggtttatcaagagtttagagagccgtaatgataccctgttgaaggtggcg
aactgtatcgtccaatatcagcaaggtttctttgaatacggtgaagaagccatgaaacct
atggtgcttaacgatattgccgaagcggtagaaatgcatgagtcgaccatctcacgagtg
acgacacagaaatacatgcatacccctaagggactttttgaactaaaatacttcttctct
agccacgtcggtactgacgatggtggggagtgctcatccacagcaatcagagccttcatt
aagaaactggttgcagcggaaaaccagaaaaaaccattgagcgacagtaagatggcgcaa
cttctggcagaacaagggatcaacgtagcccgcagaaccattgcgaagtaccgagaggct
atgctcattccgccttctaatcagcgtaaaagtttataa
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