Shewanella baltica OS185: Shew185_0105
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Entry
Shew185_0105 CDS
T00571
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sbm03012
]
Shew185_0105
Translation factors [BR:
sbm03012
]
Eukaryotic type
Elongation factors
Shew185_0105
Prokaryotic type
Shew185_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
bact_SelB_WH_2nd
MMR_HSR1
GTP_EFTU_D2
SelB-wing_1_3
SRPRB
DEC1
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
ABS06276
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Position
128565..130610
Genome browser
AA seq
681 aa
AA seq
DB search
MIIVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLRDGSRLAFIDVPG
HEKFINNMLVGVSHARHALLVLACDDGVMPQTREHLQILALLPLHSLTLVLTKRDLVDSD
MAEQLVADGLTLLAEYGIEASGFFQVSASETADLASNGVAALKAHILDLAEQESKRAEDA
SSFRMTLDRAFSVKGAGCVVTGTVISGNVCVGDSLFSSGQKAKLRVRGIHCQGQEAQRAV
TGTRVALNLTGVDNHRSPERGDWLSSLPQAEHCSRPVVHIRVFDLLGIEPLVHWQNVHCH
HGADHTLGRVSLLNEADAEGFYLAELVLEKPLLLCQDDPIVLRHIGGKQTLGAGRVLALK
VPNRKKRTPERVERLQQVARLDNPAHVVALLGQTQALELAEIAWRWQLTDEGLAMLLAQA
GLVRLGEFAVATRLLEQEKQQFITLLSEFHQQHPDQLGLGRNRLQRMSHSALPTELANKV
LDTLCQEGRMVLRGALLQLAEHRIVLDAEAQHCWQALAPWLAEQTAPVWVTEMGEYLALE
PAKLRLLCFQLVQQGFITAVVKDRYLLSEQLCYYASLVRTHIAEHGKLETAEFKDLIGLG
RKVSIQLLEFFDRSGFTRRKYRSNSREIRDAELFFSHENWRKNIGVEPTQDCWQPYPDLK
SGRLTGDDVLPIEDLGIVENA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgatcattgttactgcgggtcatgtcgatcacggcaagagtacgcttattcgcgccttg
actgggatgaataccgatcgtctgccggaggagaagcgccgcggtatgacgatcgatctc
ggctatgcgtttatgccgcttagggatggttcgcgcctcgcttttattgatgtgcctggg
catgaaaaatttatcaacaacatgctggtgggcgtgagtcatgctcgccatgccttactc
gtgctggcctgtgatgatggcgttatgccgcaaacccgcgaacatctgcaaatcctagcg
ctcttaccgcttcacagtttgaccttagtgctgactaagcgggatctggttgatagtgat
atggctgagcagcttgtcgccgatggactcactttgctggccgagtatggcattgaggcc
agtggtttttttcaggtgtcggcaagtgaaactgccgacttagcatccaatggtgtggcc
gcacttaaggcgcatattcttgatttagctgagcaggagtctaagcgggctgaggatgcc
agcagttttaggatgacgctcgatcgcgcctttagtgtgaagggtgcaggttgtgtggtt
acgggcacagtgatcagcggcaatgtgtgcgtgggtgatagtctttttagctcaggacaa
aaggccaagttgagagtacgaggcatccattgtcaaggacaagaagcccaaagggccgtc
acggggacacgtgtagcactcaatttaaccggagttgataaccataggtcgcccgaacgc
ggcgattggctaagcagcttgcctcaagctgagcactgtagccgccctgtggtgcatatt
cgagtcttcgatttattaggtattgagcccttggtacattggcaaaatgttcactgtcac
catggcgctgatcatactttagggcgagtttcgctgttaaatgaagctgatgctgaaggt
ttttatctggcggagttggtactcgaaaagccgctacttttatgccaagacgatcccatc
gtcctgcgccacattggcggtaaacagactttaggtgcagggcgagtgttggcgcttaaa
gtccctaatcgaaagaagcgcacgcctgaacgagtcgagagattacagcaagtagcgcgc
ttggataatcctgcccatgtggtggctttactcggccaaactcaggcgctagaacttgct
gaaattgcgtggcgttggcaattaaccgacgaagggctcgctatgctcttagcccaagcg
ggtttagtccgtcttggcgagtttgccgtggccacacgtttacttgagcaagaaaaacaa
cagtttattactttactgagcgagttccatcaacaacatcccgaccaacttgggcttggg
cgtaatcgcctgcaacgtatgagtcacagcgctttaccgaccgaattagccaataaagtg
ctcgatacgctgtgccaagaggggcgcatggtattgcgtggcgccttgttgcaattggcc
gagcacagaatcgtgcttgatgctgaggcgcagcattgttggcaggcacttgcgccttgg
cttgccgagcaaaccgcccccgtgtgggtcaccgaaatgggcgaatatcttgcgctagaa
cctgccaaattaagactgctgtgtttccagctggtgcaacaggggtttattactgcagtg
gtgaaagataggtatttactcagtgaacaactttgctattacgccagcttagtgcgtact
catattgcagaacatggcaagctcgaaaccgctgaatttaaagacttaatagggcttggt
cgcaaggtcagcattcagctgcttgagttttttgacagaagtggttttacccgtaggaaa
tatcgcagtaatagccgggaaattcgggatgcggagctttttttctcccatgagaattgg
cggaagaacataggagtcgaacctacccaggactgctggcagccctacccggatttgaaa
tccggacgcctcaccggagacgacgttcttccaatagaagacctagggatagtagaaaat
gcttaa
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