Shewanella baltica OS185: Shew185_4429
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Entry
Shew185_4429 CDS
T00571
Name
(GenBank) Conjugative transfer relaxase protein TraI
Organism
sbm
Shewanella baltica OS185
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
TraI_2B
AAA_19
Toprim_3
Viral_helicase1
AAA_22
DUF3221
DUF4162
Motif
Other DBs
NCBI-ProteinID:
ABS10539
LinkDB
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Position
pS18501:complement(41601..47561)
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AA seq
1986 aa
AA seq
DB search
MLSISPIASSAGGAASYYLSEEKNLNLPDVSLEKAADAKEGETNYYLKEQSAEPNTQWFG
KLAEQEGMLGKPVEEHQLKEVLAGSLNDQTLKTQNSNARNGFDFTFSAPKSVSLLALVGG
DKRLMTAHDDAVKFALSHIEKDAAQARQTNPDTKATSFENTGNLLFAMVRHKTSREEDPQ
LHTHSLTANMTKDSEGTLRALASSFKQKGGIINGTGERVYNHQKYYTSLYQSALARSVEQ
AGYQTRSLGNNLFEVEGVPQSLLDTFSTRSQQINEQTQSLGLDSQAARDVAAKDTRKSKA
YTSEATLFEQWKNKANNSGFNLTSFVTDSMSRETSLNALALKPAAIDAVSRAIEHASNTQ
NRFNYAKLVESATLEFTRGQKLDALDIKLALDKHIEDGALIPLDKESATFTSAAHIKAET
NLLESIKPKTANMRQVVDTNTLQGKGLNADNQKKVSELFASTKQVNLVNVFGSSEQLATA
LLNVGEANGKRIHIITPDMKSKLQTSERVQRDSSTVVKWIMNHFKPDHTHTLSSFTKTAN
NTNRDILVVENANKLGLNDFNALLAQAKAGNSKVILLNHANAKQGMKAGNAIEVLKKGNV
NESNWVATKQSNTAMRLHESKDSDRVNLIAKTYAQLPEKQHTQVIAGTHKDVKQLNSAIR
AELQNQGDVSRLGLNIPTLNPVFLSAQQREVVGQYTKGMVLTQWQKVGGRNQQQQLTVDS
VNRDNNTLTLIDKNGKASEINPSSKAFKAAEYVIAKPDNLHIANGDKLIMATNHQDSGLS
KQIYTINALSKEWVTLKDESGKQHSVKASALHHAPLNHGYATTPSNASPNASHHIVNIKA
YSASKEWLHDTLTQGIKHIDIFTDKAQQFDDRLEKSEVKPSSISRIMQAADMPEKFVNSQ
TTALLTQDVTAALNAIGAQHQDKGLIHNAVDFAIQHISEKEAGYSQKELIVNAIKYAFEE
KGTSITQHEIINTLQHMATNSTDKGAPSLLSAEYHDGTRWTTQAAIDTEVRILDRLQAGK
DQLAPLTSVEHAAQVLSQNQNLTDGQKDATLLITTTKDRFVGVQGLAGTGKSTMLETGID
LVKQSESILNTQPNKTPTQFIGLAPTHAAVNELKDKNVESQTVQSLLSNFLSQDAKPDQY
ANTVFLLDESSMTSNAQMDEFTHLIETTGARAVFLGDTKQLTSQKAGKPFELALNKGAIN
SVTMKDIVRQQNSTLLSAVHNIVDRQGESAIDKIQQQLPFDQYTAPTANDAVTPEKQATA
NINQSLNIISTLQPLTDNPKKNQQLATEALPATVALEYLARTPKARENTLIIAYTNKERD
DITHEIRQGLQQQKSLSTEQFTVPRLRGVHASKAELATMLPYQQGLILTTGKDSYFEIMK
VDKLNNMLTLADMKTGEEKHFFPKNHGHKFTNLWAKSEQPLAEGDSIMLRKSDIDREMQG
NKTYTVSSIDDKQMQLKSTDNHTLTLSTKDLKDAHWDYAYTRTADMAQGATYENVITAIK
GQGALTNVRRAYIDITRASKHVKIITDNPQKMMLSWVNNDPNKVSALETRDKYYPEHTPL
FNDKPLPQENPKYLDVNGYVDLKLMATELNAKLPAYSESLATQLLGEPNHDKSDKDNLTF
GKEGSLTLTTTGQYRGYFKDWKTGDKGTLINLIMVAEKCSYKDALYKADKMMNEPDKYNL
VKNPQHDELTHAIPVKQSQLEARAKQYFNEAKPIENSLAQTYLAKQGIEVTKHENLRFHD
AVYSSEKRGTFPALIANITNDKSETKAVEITYLDKSSGDIAALKINKRILGSKSGNSTTI
NKGNNSDYSIVAVGVENALKINADNKNGADVIALNNNNDTKTFNTNELRENVIVVLDTNN
SQDTAKLANDLTEKFSKENIHAVIIEPSLIPDGLNKVETTKQLVNEAVYSITTKDNTLSK
AIQSLSHDIAGTKNITMKDDSTNVATNKIKHDEHYQHLAMDSHRSPTKEHSPNIDNPKLD
IGEKTM
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgctttccatcagtcccattgcgtcgagcgctggcggcgcggccagctactacctcagt
gaagaaaagaacctcaatttgcctgacgtgtcgttagaaaaagcagcggacgccaaagaa
ggggaaaccaactattacttgaaagagcagagcgccgagcccaatacccaatggtttggc
aaactggcagagcaagagggaatgctaggtaagcccgttgaagaacatcaactcaaagag
gtgttagccggtagcctgaacgaccaaacgcttaaaacccaaaacagcaacgcccgcaac
ggttttgactttaccttttcggcgcctaaatccgtcagtttgcttgcactcgtgggcggc
gataagcgcttaatgacagcgcacgatgacgcggtaaaattcgcgttatcgcatatcgag
aaagatgcggcgcaggccagacaaactaaccctgataccaaagcgacctcttttgaaaac
acgggcaatttgctgtttgcaatggtgcgtcacaaaaccagccgtgaagaagatccgcag
ctgcacacccactcactcaccgccaacatgaccaaggacagcgagggcacattgcgcgcg
ctggcaagcagctttaaacaaaaaggcggcatcatcaatggcaccggtgagcgggtttat
aaccatcaaaaatactatacctcgctctatcaaagcgccttagcccgcagtgttgaacaa
gcgggttatcaaactcgttcactgggtaataatttgtttgaagtcgaaggtgtcccgcag
tccttgctcgataccttttcaacccgtagccagcaaatcaacgaacaaacccaaagctta
ggtttagactcccaagcggcgcgggatgtggccgcaaaggacacccgcaagagtaaagcc
tataccagcgaagccaccttgtttgagcaatggaaaaacaaagccaataacagcggcttt
aacctgacaagcttcgtgacggacagcatgtcacgagaaacatcactcaatgcgttagcg
ctcaaacccgccgctatcgatgcggtgagtcgtgcgattgagcacgccagtaacacccaa
aaccgttttaattacgcgaaattagtggaatctgccacgcttgaatttacgcgcggccag
aagctcgatgcgctcgatattaaattggcactcgataagcacattgaagatggcgcactc
attccgcttgataaagagtctgcgacctttaccagcgccgcccacatcaaagccgaaact
aacctgctagagagcatcaagccaaaaacggccaacatgcgccaagtggtcgataccaac
acgcttcaaggcaaaggcttaaatgcggacaaccaaaagaaagtctctgaactgttcgcc
agtaccaaacaagttaacctagtgaacgtctttggtagcagtgaacagctcgcgaccgcc
ctgctcaatgtcggtgaggccaacggtaaacgtattcacatcattacccctgacatgaaa
agcaaactgcaaaccagtgaacgagtgcaacgcgattcatcgactgtggtgaagtggata
atgaaccacttcaaacccgaccacacccatacactcagcagctttactaaaacggccaac
aacactaaccgcgatattttagtggttgagaacgccaataaactcggccttaacgacttt
aatgccctgctcgcgcaagccaaagcgggtaacagtaaagtgattttgctcaatcacgcc
aatgccaagcaaggcatgaaagccggtaacgctatcgaggtacttaaaaaaggcaacgta
aacgaaagcaactgggtcgccacaaaacaaagcaacacagccatgcgactgcatgaaagc
aaagacagtgacagggttaacctgattgcaaaaacttacgcgcaactgcccgagaagcaa
cacacccaagtcattgcgggcacccataaagatgtgaagcagcttaacagcgccattcgc
gcagaactgcaaaatcaaggtgatgtatcgcgccttgggctcaacatccctacccttaat
cccgtgttcttatccgcgcagcaacgggaagtcgtcggccagtacaccaagggcatggta
ctcacccaatggcaaaaagtcggtggccgcaatcaacagcagcaattgacggtggacagt
gtaaaccgtgataacaacaccctcacgctgatagacaaaaacggtaaagcatctgagatt
aaccccagcagcaaagcctttaaagccgcagagtacgtgatcgctaaaccggacaattta
catatcgccaacggcgataaactcatcatggccacaaaccatcaagacagtggtttgagc
aaacaaatttatacgatcaacgccctgtccaaagaatgggtcacgctcaaagacgaaagc
ggcaaacagcacagcgttaaagccagtgcattgcaccatgcgccgctcaatcatggttac
gccaccacgccaagcaatgccagccctaatgcaagtcaccacatcgtcaacattaaagcc
tatagcgcctcaaaagagtggttacatgacaccctgacacaaggcatcaaacacatcgat
atattcaccgacaaggcacaacaatttgatgaccgattagaaaaaagtgaggtgaaacca
tccagtatttcgcgcatcatgcaagccgctgacatgccagaaaagttcgtgaatagccaa
accacggccctgctcacccaagatgtgaccgcagcactgaatgccattggtgcccagcat
caagacaaagggcttattcacaatgccgtggactttgccatccagcacattagcgagaaa
gaagccggttactcacaaaaagagctgattgttaatgcgatcaagtacgcatttgaggaa
aaaggcaccagcattacccaacatgaaatcatcaacaccctgcaacacatggccacgaac
agcacggataaaggcgcgccctcactcctgagcgccgaataccacgacggcacccgctgg
acaacccaagccgctatcgataccgaagtgcgtattttagacagactgcaagcgggcaaa
gatcaacttgcgccccttaccagcgttgaacacgccgcgcaggtactcagtcaaaatcaa
aacctgaccgatggccaaaaagacgcgaccttgcttatcaccaccaccaaagaccgattt
gtgggtgttcaagggttagcgggtacgggtaaatcgaccatgcttgaaacgggtatcgat
cttgttaaacaaagcgaatccattctcaacacacaacccaataagacaccgacacaattc
ataggtctagcgccgacacacgccgccgttaacgaactcaaagacaagaacgtcgaaagc
caaacggtgcaatcactcctaagcaactttttaagccaagatgcgaaacctgaccaatac
gccaacaccgtgttcttgctcgatgaatcctcgatgaccagtaacgcccaaatggatgaa
tttacccatttgattgagacaacaggcgcgcgcgccgtgttcttgggtgacactaaacag
ttaacgtcccaaaaagcgggtaaaccttttgaactcgcgttaaacaaaggcgcaatcaat
agcgtcaccatgaaagacattgtgcgccaacagaacagcacgctactgagtgcagtacac
aatattgtcgatcgccaaggcgaaagcgctattgataaaattcagcaacaattacccttt
gaccaatacaccgcgcccaccgcgaacgacgcggtaacgcccgaaaagcaggctaccgct
aacatcaatcaaagcttgaatatcatttcaactttgcagccgctaactgataacccaaag
aaaaaccagcaacttgcgaccgaagccctgcccgccactgtggcactggaatacttggcc
agaacacctaaagcgcgtgaaaatacccttatcattgcgtacaccaacaaagaacgcgac
gacattacccacgaaattcgccaagggttacagcaacaaaaaagcctcagtaccgagcaa
ttcaccgtgccgcgattacgcggagttcatgccagtaaggcggaactggcgaccatgttg
ccctatcagcaggggttaatcctgacgaccggtaaagacagttattttgaaattatgaag
gttgataagctcaataacatgctcaccctcgcggatatgaaaaccggcgaggaaaagcat
ttcttccccaaaaatcatggtcacaaattcacgaacctttgggctaagagtgagcaacct
ctcgcagaaggcgacagtatcatgctccgcaaaagcgatattgaccgtgaaatgcagggc
aacaaaacctataccgttagcagcattgacgataaacaaatgcagctcaaatccacggat
aaccacacattaacgctctcaaccaaagatttgaaagatgctcattgggattacgcatac
acccgcaccgccgatatggcgcaaggggcaacctatgagaatgtcattaccgcgattaag
ggccaaggtgcattaactaacgtaaggcgcgcgtatatcgatatcacccgtgccagtaag
cacgtaaaaatcatcaccgataacccgcaaaaaatgatgctctcatgggtcaataacgat
cccaataaagtctctgcacttgagacaagagataagtattaccctgaacataccccgcta
tttaatgacaaacccttgccgcaggaaaacccaaagtacctcgatgtaaatggatatgtg
gatctaaaactgatggccaccgagctaaatgccaagcttccggcctacagtgaatcactg
gcaacgcagcttttaggtgagccgaaccacgataaatcagacaaagataacctgacattt
ggcaaagaggggagcctaacattgaccacaacgggccaatatcgtggctattttaaagac
tggaaaaccggcgataaaggcaccttaattaacctgattatggtcgctgaaaaatgcagt
tataaagatgcactttataaagccgataaaatgatgaacgaacccgataaatataatctg
gtaaaaaacccacagcatgatgaattaacacatgccattccggttaagcaaagccaatta
gaagcgcgcgcgaagcaatactttaacgaagctaaacctatagaaaactcactcgcacaa
acctatttagccaagcaaggaatcgaggttacgaagcatgaaaacttacggtttcacgat
gccgtttattcgtcagaaaaacgtggaaccttccccgcattaatcgcgaatatcaccaat
gacaagagtgaaaccaaggcagtagaaatcacttaccttgataaatccagcggtgacatt
gcagcgctaaaaataaataagcgcatactcggctctaaatcggggaacagcacgacgatc
aacaaaggcaataattcagactatagtattgtcgctgtcggtgtagagaatgcgcttaag
ataaatgctgacaataaaaacggggctgacgttattgcgctaaataataataatgacact
aaaacatttaatacaaatgaattgcgcgaaaacgtgatagtggtacttgatactaataat
tcacaagacactgcaaaactggctaatgaccttacggaaaaattcagtaaggaaaatata
catgcggttattattgaacccagtctgatacctgacggcttaaacaaagtcgaaacgaca
aagcaattagtcaatgaagcggtctatagcataacgacaaaagacaatacactatctaaa
gccattcaatcattgagtcatgatattgcaggcacaaaaaatatcacgatgaaagatgac
agcactaacgtagcaacgaataaaataaagcacgatgaacactatcaacatttagcaatg
gatagccaccgttcacccacgaaagaacatagccccaacatcgacaatcctaaattggat
attggggaaaagaccatgtaa
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