Shigella boydii Sb227 (serotype 4): SBO_4021
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Entry
SBO_4021 CDS
T00301
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbo03032
]
SBO_4021 (hupA)
03036 Chromosome and associated proteins [BR:
sbo03036
]
SBO_4021 (hupA)
03400 DNA repair and recombination proteins [BR:
sbo03400
]
SBO_4021 (hupA)
DNA replication proteins [BR:
sbo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SBO_4021 (hupA)
Chromosome and associated proteins [BR:
sbo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SBO_4021 (hupA)
DNA repair and recombination proteins [BR:
sbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SBO_4021 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ABB68461
ShiBASE_China:
SBO4021
UniProt:
Q31TZ7
LinkDB
All DBs
Position
4058705..4058977
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AA seq
90 aa
AA seq
DB search
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa
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