Shigella boydii Sb227 (serotype 4): SBO_4064
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Entry
SBO_4064 CDS
T00301
Symbol
alr
Name
(GenBank) alanine racemase 1
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00470
D-Amino acid metabolism
sbo01100
Metabolic pathways
sbo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBO_4064 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SBO_4064 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
SBO_4064 (alr)
Enzymes [BR:
sbo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SBO_4064 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
Precursor biosynthesis
Racemase
SBO_4064 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ABB68497
ShiBASE_China:
SBO4064
UniProt:
Q31TW1
LinkDB
All DBs
Position
complement(4106799..4107878)
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AA seq
359 aa
AA seq
DB search
MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARL
EEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVW
MKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNT
FCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS
LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGR
VAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcaactgttgtgattaaccgccgcgctctgcgacacaacctgcaacgtctt
cgtgaactggcccctgccagtaaaatggttgcggtggtgaaagcgaacgcttatggtcac
ggtcttcttgagaccgcgcgaacgctccccgatgctgacgcctttggcgtagcccgtctc
gaagaagctctgcgactgcgtgcggggggaatcaccaaacctgtactgttactcgaaggc
ttttttgatgccagagatctgccgacgatttctgcgcaacattttcataccgccgtgcat
aacgaagaacagctggctgcgctggaagaggctagcctggacgagccggttaccgtctgg
atgaaactcgataccggtatgcaccgtctgggcgtaaggccggaacaggctggggcgttt
tatcatcgcctgacacagtgcaaaaacgttcgtcagccggtgaatatcgtcagccatttt
gcgcgcgcggatgaaccaaaatgtggcgcaaccgagaaacaactcgctatctttaatacc
ttttgcgaaggcaaacctggtcaacgttccattgccgcgtcgggtggcattctgctgtgg
ccacaatcgcattttgactgggtgcgcccgggcatcattctttatggcgtctcgccgctg
gaagatcgctccaccggtgccgattttggctgtcagccagtgatgtcactaacctccagc
ctgattgccgtgcgtgagcataaagccggagagcctgttggttatggtggaacctgggta
agcgaacgtgatacccgtcttggcgtagtcgcgatgggctatggcgatggttatccgcgc
gccgctccatccggtacgccagtgctggtgaacggtcgcgaagtaccgattgtcgggcgc
gtggcgatggatatgatctgcgtagacttaggtccacaggcgcaggacaaagccggggat
ccggtcattttatggggcgaaggtttgcccgtagaacgtatcgctgaaatgacaaaagtg
agcgcttacgaacttattacgcgcctgacttcaagggtcgcgatgaaatacgtggattaa
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