Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101028515
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Entry
101028515 CDS
T04350
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101028515 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101028515 (COL25A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101028515 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF1467
Motif
Other DBs
NCBI-GeneID:
101028515
NCBI-ProteinID:
XP_010338385
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MLVKKHAGKGGGRDPGSEDPSPARLQCARTMPPCAVLAALLSAVAVVSCLYLGVKTNDLQ
ARIAALESAKGTPSIHLLPDTLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKG
SIGAPGIPGMNGQKGEPGLPGAAGQGGIAGPKGEPGEQGEKGDAGENGPKGDTGEKGDPG
SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE
AGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDTGAQGPRGPPGQKGDQGAT
EIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD
MGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPH
GLPGPKGTDGPMGPHGPAGPKGERGEKGAVGEPGPRGPYGLPGKDGEPGLDGFPGPRGEK
GDPGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcacgcagggaaaggagggggccgggatccgggatccgaggacccg
agccctgccaggctgcaatgtgcccggaccatgcccccgtgcgccgtcctggcggccctc
ctgtcagcggtggccgtggtgtcttgtctgtacctgggtgtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaagggaccccttccattcatctgctgcctgat
actctggatcagctaaaggctatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagaatgtaactgc
ccagcaggccctccagggaaacgaggtaagagaggccgaagaggagaatctggtcctcct
ggccctcctggtcctaaaggtgacaagggagaacaaggtgatcagggacctcggatggtg
tttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaacgccgcctg
attaagggtgaccaaggacaggcaggacctccaggacccccaggccctccaggcccaaga
ggaccacctggggacacagggaaagatggcccccgtggaatgccaggagtacccggtgaa
ccaggaaaaccaggagaacaaggcttgatgggtcctctagggcctccaggacaaaagggt
tctattggagcacctggaattccagggatgaatgggcaaaagggtgagcctgggttacct
ggagcagcaggacagggtggaatagcaggaccaaagggagaacccggagaacaaggtgaa
aagggagatgctggagagaatggccccaaaggtgacacaggcgaaaagggtgaccctgga
tcatctgctgcaggaattaagggagaacctggagaatctggtcgtccagggcaaaagggt
gaaccagggcttcctgggcttcctggacttccggggataaagggagaaccaggtttcatt
ggtcctcaaggagaaccaggcttaccaggtttaccgggaactaaaggtgaacggggagaa
gcagggcctcctggaagaggtgagcgaggggaacctggagcccccggaccaaaggggaaa
caaggtgaatcaggaactagaggcccaaaggggtcaaagggggatcgtggagacaaaggg
gacactggagctcagggaccaaggggtccacctggtcaaaaaggagatcaaggagccact
gagatcatagactacaacggcaacctccatgaagccttacagaggattaccaccttaact
gtcacgggtccccctggacctcctggacctcaaggactgcaagggccaaagggagagcaa
ggatctccaggaatcccaggaatggatggagagcagggactcaaaggctcaaagggagac
atgggggacccaggtatgccaggtgaaaaaggaggaattggacttcctggattgccggga
gccaatggaatgaaaggagaaaaaggagattctggaatgccgggtccacagggtccttct
atcataggcccaccaggcccaccaggtccccatggcccacctggccccatgggacctcat
ggacttcctggaccaaagggtacagatggtcctatgggaccccatggccctgcaggtccc
aaaggagaaagaggcgaaaaaggagctgtgggagagcccggaccgagggggccctatggg
ctgcctgggaaggatggagagcctggtcttgatggcttccctggtccacggggtgagaag
ggtgacccaggagaaaagggagaaaagggattccgtggcgttaagggggaaaaaggggag
ccaggccagcctggcctggatgggctggatgccccttgccaattggggccagatggctta
cccatgcctggctgttggcaaaagtga
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