Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101032798
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Entry
101032798 CDS
T04350
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04820
Cytoskeleton in muscle cells
sbq04974
Protein digestion and absorption
sbq05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101032798 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101032798 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101032798 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101032798 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101032798 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101032798 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbq04147
]
101032798 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101032798 (COL6A1)
Exosome [BR:
sbq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101032798 (COL6A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101032798 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
101032798 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
101032798
NCBI-ProteinID:
XP_010348395
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MRAARTLLPLLLQACWAAAQDEPESPRAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIQGLTRMPGGRDALKSSVDAV
KYFGKGTYTDCAIKKGLEQLLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEAISQTIDTIVDMIK
NNVEQVCCSFECQPARGPPGPRGDPGFEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKPRVPQASAVGPHTCCWLCTDGTPPRPLRPAGHSPERPGSCGNQNWEWAKS
SAEGCQRAGAPSFEFASSSAWHSCAFSSGNQALPLRLGGPQLGLTGIKVGTFQEGEPGAD
GEAGRPGSSGPPGDLGEPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGRR
GPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGAP
GDPGLMGERGEDGPPGNGTEGFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEAGDPGDDN
NDIAPRGVKGAKGYRGPEGPQGPPGHPGPPGPDECEILDIIMKMCSCCECKCGPIDLLFV
LDSSESIGLQNFEIAKDFVVKVIDRLSRDELVKFEPGQSSAGVVQYSHSQMQEHVSLRSP
GIRNMQELKEAIKSLQWMAGGTFTGEALQYTRDQLLPPSPHSRIALVITDGRSDTQRDTT
PLNVLCGPGIQVVSVGIKDVFDFVPGSDQLNVISCQGLAPSQGRPGISLVKENYAELLED
AFLKNVTAQICIDKKCPDYTCPITFSSPADITILLDGSASVGSHNFDTTKHFAKRLAERF
LEAGRTDPAHDVRVAVVQYSGTGQQRPERASLQFLQNYTALASSVDAMDFFNDATDVNDA
LAFVTRFYREASPGAAKKRLLLFSDGNSQGATPAAIEKAVQEAQRAGLEIFVVVVGSQVN
EPHIRVLVTGKTAEYDVAYGERHLFRVPSYQALLRGVFHQTVSRKVALG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggcccgcactctgctgcccctgctgctacaggcctgctgggcggccgcacag
gacgagccagagtccccaagagcagtcgccttccaagactgccctgtggacctgttcttt
gtgctggacacgtctgagagcgttgccctgaggctgaagccctacggggccctggtggac
aaggtcaagtccttcaccaagcgcttcatcgacaacctgagagataggtactaccgctgt
gaccggaacctggtgtggaacgcgggcgcgctgcactacagtgacgaggtggagatcatc
cagggcctcacgcgcatgcccggcggccgtgacgccctcaagagcagcgtggatgccgtc
aagtacttcgggaagggcacctacaccgactgtgccatcaagaaggggctggagcagctc
ctcgtggggggctcccacctgaaggagaacaagtacctgattgtggtgaccgacgggcac
ccgctggagggctacaaggagccgtgcgggggactggaggatgctgtaaacgaggccaag
cacctgggcatcaaagtcttctcagtggccatcacgcccgaccacctggagccccgcctc
agcatcattgccacggaccacacgtaccggcgcaatttcacagcggctgactggggacag
agccgcgatgcagaggaggccatcagccagaccatcgacaccatcgtggacatgatcaaa
aataacgtggagcaagtgtgctgctccttcgagtgccagcctgcaagaggacctccaggg
ccccggggcgaccccggcttcgagggagagcgaggcaaaccggggctgcccggagagaag
ggagaagctggagatcctggaagacccggggacctcggacctgttggataccaggggatg
aagggagaaaaagggagccgcggggagaagcccagggttcctcaggcctccgccgtcggt
ccccacacctgctgctggctctgcacagatgggaccccaccgcgtcccctgcggcctgca
ggtcacagcccagaacggcccggttcatgcggaaatcagaactgggaatgggccaagagt
agcgctgaaggctgccagagggcgggagcgcctagctttgagtttgccagttcctcggcc
tggcatagctgtgccttctctagcgggaaccaagccctgccccttagactaggtggccct
cagctgggactcacagggatcaaagttggaactttccaggagggcgagcctggagctgac
ggggaggcggggaggcccggcagctcggggccacctggagacctgggcgagccaggagag
cctggtcccccaggagagaaaggagaggcgggcgacgaggggaacccaggacctgacggt
gcccccggggagcggggcggccctggagagagaggaccacgggggaccccaggcaggcgg
ggaccaagaggagaccctggtgaagctggcccgcaaggtgaccagggacgagaagggccc
gttggcatccctggagacccgggcgaggccggccccatcggacctaaaggctaccgagga
gatgagggtcccccagggtccgagggcgccagaggagcgccaggacctgccggggcccct
ggagaccctgggctgatgggtgagaggggtgaagacggcccccctggaaatggcacggag
ggcttccccggcttccccgggtatccgggaaacaggggtcctcctgggataaacggcaca
aaaggctaccccggcctcaagggggatgagggggaagccggggaccctggagatgataac
aacgacattgcaccccgaggagtcaaaggcgcaaaggggtaccgtggccccgagggcccc
caggggcccccaggacatccaggaccacctgggccggacgaatgtgagattttggacatc
atcatgaaaatgtgctcttgctgtgaatgcaagtgcggccccatcgacctcctcttcgtg
ctggacagctcggagagcatcggcctgcagaacttcgagatcgccaaggacttcgtggtc
aaggtcatcgaccggctgagccgggacgagctggtcaagttcgaaccggggcagtcgtcc
gcgggcgtggtgcagtacagccacagccagatgcaggagcacgtgagcttgcgcagccct
ggcatccggaacatgcaggagctcaaggaagccatcaagagcctgcagtggatggcaggt
ggtaccttcacgggagaggcgctgcagtacacgcgagaccagctgctgccacccagcccg
cacagccgcattgccctggtcatcacggacgggcgctccgacacccagagggacaccacg
ccgctcaacgtgctctgcggccctggcatccaggtggtctccgtgggcatcaaggacgtg
tttgactttgtcccgggctccgaccagctcaatgtcatttcctgccaaggcctggcgccc
tcccagggccggcccggcatctcgctggtcaaggagaactacgcagagctgctggaggat
gccttcctgaagaatgtcacggcccagatctgcatagacaagaaatgtccagattacacc
tgtcccatcacgttctcctccccggccgacatcaccatcctgctggatggctcggccagc
gtgggcagccacaactttgacaccaccaagcacttcgccaagcggctggccgagcgcttc
ctcgaggcgggcaggacggacccggcccacgacgtgcgggtggcggtggtgcagtacagc
ggcacgggccagcagcggccggagcgggcgtcactgcagttcctgcagaactacacggcc
ctggccagcagcgtcgacgccatggacttcttcaacgacgccaccgacgtcaacgacgcc
ctggccttcgtgacccgcttctaccgcgaggcctcgcccggcgctgccaagaagaggctg
ctgctcttctcggacggcaactcgcagggcgccacgcccgcggccatcgagaaggccgtg
caggaggcccagcgggcaggcttggagatcttcgtggtggttgtgggcagccaggtgaac
gagccccacatccgcgtcctggtcaccggcaagacggccgagtacgacgtagcctacggc
gagcgccacctgttccgggtccccagctaccaggccctgctccgtggcgtcttccaccag
acggtctccaggaaggtggcactgggctag
DBGET
integrated database retrieval system
