Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101034614
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Entry
101034614 CDS
T04350
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101034614 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbq03021
]
101034614 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101034614 (SUPT5H)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101034614 (SUPT5H)
RNA polymerase I system
101034614 (SUPT5H)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
101034614 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
101034614
NCBI-ProteinID:
XP_003943188
UniProt:
A0A2K6SYB3
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMVPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctccgaggaggaggacagcgagcgcagtagtgac
ggcgaggaggccgaggtagaggaagagcggcgcagtgcagcaggcagtgagaaggaagaa
gagcctgaggaggaagaggaggaggaagaggaggaggaatacgatgaggaagaggaggag
gaagatgatgaccggccccccaagaaaccccgccacggaggcttcattctggatgaggct
gatgtcgatgatgagtatgaggacgaggaccagtgggaggatggagcagaggacatccta
gagaaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagatcgttca
ggggctcgccgcctacaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatatgccaagtcatctgtgggagagacggtgtatggaggatctgatgag
ctctcagatgacatcacccagcagcagctgctcccaggagtcaaggatcccaatctgtgg
actgtcaaatgtaagatcggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagatcaagtcagtagtggcaccagagcat
gtgaagggctacatctacgtagaggcctacaagcagacccatgtgaagcaggccatcgag
ggggtgggcaacctgcggcttggctactggaaccagcagatggtgcccattaaggagatg
acagacgtgctcaaagtggtgaaagaggtggccaacctgaaaccaaagtcctgggtccgc
ctcaagcggggcatctacaaggatgacattgctcaggtggactacgtggagcccagccag
aacaccatctccctgaagatggtcccacgaattgactacgatcgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gatgctgagaagatcaggtccctggggggcgatgttgcctctgatggtgacttcctcatc
tttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgatcacggagggtgtgaagcccacactctctgaactggagaagtttgaggaccagcca
gagggcatcgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttc
caacccggggacaatgtagaggtctgtgagggtgagctcatcaacctgcagggcaagatt
ctcagtgtggatggcaacaagatcaccatcatgcccaagcacgaagacctcaaggacatg
ctggagttcccagcccaggaacttcggaaatacttcaagatgggggaccacgtgaaggta
attgctggccgattcgagggtgacacaggcctcatcgtgcgggtggaggagaatttcgtt
atcctgttctctgacctcaccatgcatgagctgaaggtgctcccccgcgacctgcagctc
tgctcagagacagcatcgggtgtggatgttgggggccagcacgaatggggcgaactggtg
cagctggacccccagactgtgggtgtcatcgtgcgattagagcgggaaaccttccaggtg
ttgaacatgtacgggaaggtggtaacagtcaggcatcaggctgtgacccgtaagaaggac
aaccgctttgctgtggccttggactcagagcagaacaacatccacgtgaaagacatcgtc
aaggtcattgacggcccccactcaggccgagagggggagattcgccatctcttccgcagc
tttgccttcctacattgcaagaaactggtggagaacgggggcatgtttgtctgcaagacc
cgccacctggtgctggctgggggctcaaagccacgtgatgtgaccaacttcaccgtgggt
ggctttgcgcctatgagtccccggatcagcagccccatgcaccccagtgctggaggtcag
cgtggtggctttggtagcccaggtggcagcagtggcggcatgagcaggggccggggccgg
agggacaacgagctcattggccagactgtgcgcatctcccaggggccctacaaaggctac
attggtgtggtgaaggatgccacagagtccacagcccgcgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcggctcaccacggtgggctcacggcgcccgggtggc
atgacctcgacctatgggcggacgcccatgtatggctctcagacgcccatgtatggctct
ggctcccgaacgcccatgtatggttcacagacacccctccaggatggcagccgcacccca
cactatggctcgcagacgcccctgcatgatggtagccgcactcctgcgcagagtggggcc
tgggaccccaacaaccccaacacgccatcacgggctgaagaagaatatgagtatgccttc
gatgatgagcctaccccatccccgcaggcctatgggggaactcccaatccccaaacacct
ggctaccccgacccctcatccccacaggtcaacccacaatacaacccacagacgccaggg
acgccggccatgtataacacagaccagttctctccctatgctgccccctccccacaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaacacccactccccggccagctaccaccctacaccctcacccatggcctatcag
gctagccccagcccgagccctgttggctacagtcctatgacacctggagctccctcccct
ggtggctacaaccctcacacaccaggctcaggcatcgagcagaactccagcgactgggta
accactgacattcaggtgaaggtgcgggacacctacctggacacacaggtggtgggacag
acgggtgtcatccgcagtgtcacggggggcatgtgctctgtgtacctgaaggacagtgag
aaggtcgtcagcatttccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaagtgatcctgggcgaggatcgggaagccacaggcgtcctgctgagcatcgatggt
gaggatggcattgtccgtatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaagcctga
DBGET
integrated database retrieval system
