Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101039094
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Entry
101039094 CDS
T04350
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03440
Homologous recombination
sbq03450
Non-homologous end-joining
sbq04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101039094 (RAD50)
03450 Non-homologous end-joining
101039094 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101039094 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbq03032
]
101039094 (RAD50)
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101039094 (RAD50)
DNA replication proteins [BR:
sbq03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101039094 (RAD50)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101039094 (RAD50)
BRCA1-C complex
101039094 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
101039094 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_21
SMC_N
Crescentin
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
101039094
NCBI-ProteinID:
XP_003920657
UniProt:
A0A2K6V0L4
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMICTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQITSKEAQLTSSKDI
VKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVKERQERETKSANQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LIKAERDLSKAEKNSNVETLKMEVINLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSVIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKMCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQISPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIENIKRNHSLALGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGFNVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgaggagttttggaattgaagacaaa
gataagcaaattatcactttcttcagtccccttacaattttggttggacccaatggggcg
ggaaagacgaccatcattgaatgtctgaaatatatttgtactggagatttccctcctgga
accaaaggaaatacgtttgttcatgatcccaaggttgctcaagaaacagatgtgagagcc
cagattcgtctgcaatttcgtgatgtcaatggagaacttatagctgtacaaagatctatg
atatgtactcagaaaagcaaaaagacagaatttaaaactctggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctaagctctaagtgtgcagaaattgaccgagaaatg
atcagttctcttggggtttccaaggctgtgctaaataatgtcattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagccacaagatacattaaagccttggaaacacttcggcaagtacgtcagacacaaggt
cagaaagtaaaggaatatcaaatggaacttaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgtgatcagattacaagtaaggaagcccagttaacatcttcaaaggacatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacat
aatctctctaaaataatgagacttgacaatgaaattaaagccttggagagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacttatatcacaatcaccagaggacagtaagggagaaagaaagg
aagttggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttgagcttggaccattcagtgaaagacagattaaaaactttcacaaacttgtg
aaagagagacaagaaagggaaacaaaaagtgccaaccaactaatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagagataagaaaactggactggga
agaataattgagttaaaatcagaaatcctaagtaagaagcagaatgagctaaaaaatgtg
aagtatgaattacagcagttggaaggatcttcagaccggattcttgaactggaccaggag
ctcataaaagctgaacgtgatttaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaatggaagtaataaaccttcaaaatgaaaaagcagacctagacaggaccctacgtaaa
cttgaccaggagatggagcagttaaaccatcatacaacaacacgaacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacctcattgttgggatattttcccaataaaaaacagcttgaagactggcta
catagcaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaggaa
ctagcttcagctgagcagaataaaaatcatataaataatgaactaaaaaggaaggaagaa
cagttgtccagttacgaagacaagctgtttgatgtttgtggtagccaggattttgacagt
gatttagacaggcttaaagaggaaattgaaaaatcatcaaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacagatgaaaaccagtcatgt
tgtcccgtttgtcagagagtttttcagacagaggctgaattacaagaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaggaaaagcggcgtgatgaaatgctgggacttgtgcccatgaggcaaagcgtaatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaagaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaaatgtgcctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggaatagac
ttagatcgtactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaagttagat
acagtttctagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
cagcatctaaaaagtacagcaaatgagctaaaatctgagaaacttcagatatccactaat
ttgcaacgtcgtcagcaattggaggagcagactgtggaattatccactgaagttcagtct
ttgtacagagagataaaggatgctaaagagcagataagccctttggaaacaacattggaa
aagttccagcaagaaaaagaagaattaatcaacaaaaaaaatacaagcaacaaaatagca
caggataaactgaatgatattaaagagaaggttaaaaatattcatggttatatgaaagac
attgaaaattatattcaagatgggaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcagctaagtgaatgtgagaaacacaaagaaaagataaatgaagat
atgcgaatcatgagacaagatattgatacacagaagatacaagaaaggtggctgcaggat
aacctcactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttgcaaatgaaaaatgaacaccagaagttg
gaagagaacatagaaaatataaaaagaaatcacagtttggcattagggcgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaaccgcaatttcgggatgct
gaggaaaagtatagagaaatgatgattgttatgaggacaacagaacttgtgaacaaggat
ctggatatttattataagactcttgaccaagcaataatgaagtttcacagtatgaaaatg
gaagaaatcaataaaattattcgtgatctgtggcggagtacctatcgtggacaagatatt
gaatacatagaaatacggtctgatgctgatgaaaatgtatcagcttctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtgttagcctcactcatcattcgcctggccctggctgaaacg
ttctgcctcaactgtggcatcattgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcacccatgatgaagattttgtggagcttttaggacgttct
gaatatgtggagaaattctacaggattaaaaagaacatcgatcagtgctcagagattgtg
aaatgcagcgttagttccctgggatttaatgttcattaa
DBGET
integrated database retrieval system
