Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101044635
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Entry
101044635 CDS
T04350
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X6
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03082
ATP-dependent chromatin remodeling
sbq04714
Thermogenesis
sbq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101044635 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101044635 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101044635 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbq03000
]
101044635 (ARID1B)
03021 Transcription machinery [BR:
sbq03021
]
101044635 (ARID1B)
03036 Chromosome and associated proteins [BR:
sbq03036
]
101044635 (ARID1B)
Transcription factors [BR:
sbq03000
]
Eukaryotic type
Helix-turn-helix
ARID
101044635 (ARID1B)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101044635 (ARID1B)
Chromosome and associated proteins [BR:
sbq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101044635 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Presenilin
Motif
Other DBs
NCBI-GeneID:
101044635
NCBI-ProteinID:
XP_003933806
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MDPVVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMGGIQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG
DQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG
SQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHAGISS
FQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQP
CGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVM
QAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSMAPTMVNSSAAS
MGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERK
LWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQ
GPQTPQSTGSNSMAEVPSDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPK
RNSMTPNTPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSGMQDVY
SQSPSGAVSSLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP
NYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRE
RMQGPGQLQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPY
PGMNRTDDMMVPDQRINHESQWPSHASQRQPYMSSPASMQPITRPPQPSYQTPPSLPNHI
SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPASQATGPPPQPPPIRREITFPP
GSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARNDDSQSLTEDSGK
EEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDTAADPKEKPKQASKFDKLPIK
IVKKNNLFVVDRSDKLGHVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPL
SSAGRKKEQEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQA
KSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPG
LVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVPCSKDEWWWDCLEVLRDNTLVTLAN
ISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLS
IQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIA
VQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDE
NRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtggtgatgaagagacctcagttgtatggcatgggcagtaaccctcactct
cagcctcagcagagcagcccgtacccaggaggttcctatggccccccaggcccacagcgg
tatcccattggcatccagggtcggactcctggggccatgggaggaattcagtaccctcag
cagcagatgccacctcagtatggacagcaaggtgtgagtggttactgccaacagggccaa
cagccatattacagccagcagccgcagcccccgcacctcccgccccaggcgcagtatctg
ccgtcccagtcccagcagaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actagatctcaacctcctctggcccccggaaaacctaaccatgaagacttgaacctaata
cagcaagagagaccatcaagtttaccagatctgtctggctccattgatgacctccccacg
ggaacagaagcaactttgagctcagcagtcagcgcctctgggtccacgagcagccaaggg
gatcagagcaacccggcgcagtcacctttctccccacatgcatcccctcatctctccagc
atcccggggggcccgtctccctctcctgtcggctctcctgtaggaagcaaccagtctcga
tctggcccaatctctcctgcaagtatcccaggcagtcagatgcctccgcagccacccggg
agccagtcagaatccagttcccatcccgccttgagccagtcaccaatgccacaggaaaga
ggttttatggcaggcacacaaagaaaccctcagatgtctcagtatggacctcaacagaca
ggaccatctatgtcgcctcatccttctcctgggggccagatgcatgctggaatcagtagc
tttcagcagagtaactcaagtgggacttacggtccacagatgagccagtatggaccacaa
ggtaactactccagacccccagcgtatagtggggtgcccagtgcaagctacagcggccca
gggcccggtatgggtatcagtgccaacaaccagatgcatggacaagggccaagccagcca
tgtggtgctgtgcccctgggacgaatgccatcagctgggatgcagaacagaccatttcct
ggaaatatgagcagcatgacccccagttctcctggcatgtctcagcagggagggccagga
atggggccgccaatgccaactgtgaaccgtaaggcacaggaggcagccgcagcagtgatg
caggctgctgcgaactcagcacaaagcaggcaaggcagtttccccggcatgaaccagagt
ggacttatggcttccagctctccctacagccagcccatgaacaacagctccggcctgatg
aacacgcaggcgccgccctacagcatggcacccaccatggtgaacagctcggcagcatct
atgggtcttgcagatatgatgtctcctggtgaatccaaactgcccctgcctctcaaagca
gatggcaaagaagaaggcactccacagcccgagagcaagtcaaagaagtccagctcctcc
accaccactggcgagaagatcacaaaggtgtatgagctggggaatgaaccagagagaaag
ctctgggtcgaccgatacctcaccttcatggaagagagaggctctcctgtctcaagtctg
cctgccgtgggcaagaagcccctggacctgttccgactctatgtctgcgtcaaagagatt
gggggtttggcccaggttaataaaaacaagaagtggcgtgagctggcaaccaacctcaac
gttggcacctcaagtagtgcagcaagctccctgaaaaagcagtatattcagtacctgttt
gccttcgagtgcaagatcgaacgcggggaggagcccccgccagaagtcttcagcaccggg
gacaccaagaagcagcccaagctccagccgccatctcctgctaactcaggatccttgcaa
ggcccacagaccccccagtcaactggcagcaattccatggcagaggttcccagtgacctg
aagccacctaccccagcctccacccctcatggacagatgaccccaatgcaaggtggaaga
agcagtacaatcagtgtgcatgacccattctcagacgtgagtgattcatccttcccgaaa
cggaactccatgactccaaacaccccctaccagcagggcatgagcatgcccgatgtgatg
ggcaggatgccctatgagcccaacaaggacccctttgggggaatgagaaaagtgcctgga
agcagcgagccctttatgacgcaaggacagatgcccaacagcggcatgcaggacgtgtac
agccagagcccctccggagcagtgtccagtctgggcatggggcagcgccagcagtttccc
tatggagccagttacgaccgaaggcatgaaccttatgggcagcagtatccaggccaaggc
cctccctcgggacagccgccgtatggagggcaccagcccggcctgtacccacagcagccg
aattacaaacgccatatggacggcatgtacgggcccccagccaagcgccacgagggcgac
atgtacaacatgcagtatggcagccagcagcaggagatgtacaaccagtacggcggctcc
tactcggggccggaccgcaggcccatccagggccagtacccctatccctacagcagggag
cggatgcagggcccggggcagctccagacgcacggcatcccgcctcaaatgatgggcggc
ccgctgcagtcgtcctccagcgaggggcctcagcagaatatgtgggcagcacgcaatgat
atgccttatccctaccagaacaggcagggccctggcggccctgcacaggcgcccccttac
ccaggcatgaaccgcacggacgatatgatggtacccgatcagaggataaaccatgagagc
cagtggccttctcacgccagccagcgtcagccttacatgtcgtccccagcctccatgcag
cccatcacgcgcccgccacagccgtcctaccagacgccaccgtcactgccaaatcacatc
tccagggcgcccagcccagcgtccttccagcgctccctggagaaccgcatgtctccaagc
aagtctccctttctgccctccatgaagatgcagaaggtgatgcccacggtccccgcatcc
caggccactgggccgccgccccagccaccccccatcagaagggagattacctttcctcct
ggctcagtagaagcatcacagccggtcttgaaacaaagacgaaagattacctccaaagat
atcgttactcctgaggcgtggcgtgtgatgatgtcccttaaatcaggtcttttggctgag
agtacgtgggctttggacactattaatattcttctgtatgatgacagcactgttgcaact
ttcaatctctcccagttgtctggatttctcgaacttttagtcgagtactttagaaaatgc
ctgattgacatttttggaattcttatggaatacgaagtgggagaccccagccaaaaagca
cttgaccacaacgcagcaaggaacgatgacagccagtccttgacagaggattctgggaaa
gaggaggaagatgctgaatgtattgatgacgacgaggaagacgaggaggacgaggaggaa
gacagcgagaagacagaaagcgatgagaagagcagcatcgctctgactgccccggacacc
gctgcagacccaaaggagaagcccaagcaagccagtaagttcgataagctgccaatcaag
atagtcaaaaagaacaacctgtttgttgtggaccgatctgacaagttggggcatgtgcag
gagttcagcagtggacttctgcactggcagctcggcgggggcgacaccaccgagcacatc
cagactcactttgagagcaagatggaaattcctcctcgcaggcgcccgcctcccccttta
agctctgcaggtagaaagaaagagcaagaaggcaaaggcgactctgaagagcagcaagag
aaaagcatcatagccaccatcgatgacgtcctctctgctcggccaggggcactgcccgaa
gacgcaaaccctgggccccagaccgaaagcagtaagtttccctttgggatccagcaagcc
aaaagtcaccggaacatcaagctgctggaggacgagcccaggagccgggacgagacccca
ctgtgcaccatcgcgcactggcaggactccctggctaagcggtgcatctgtgtgtccaat
atcgtccgtagcttgtcgttcgtgcctggcaacgatgccgaaatgtccaaacatccaggc
ttggtgctgatcctggggaagctgattcttcttcaccacgagcatcccgagagaaagcga
gcaccgcagacctatgagaaggaggaggacgaggacaagggggtgccatgcagcaaggat
gagtggtggtgggactgcctcgaggtcttgagggataacacactggtcacgttggccaac
atttccgggcagctagacttgtctgcttacacggaaagcatctgcttgccaattttggat
ggcttgctgcactggatggtgtgcccgtctgcagaggcacaagatccctttccaactgtg
ggacccaactcggtcctgtcgcctcagagacttgtgctggagaccctctgtaaactcagt
atccaggacaataatgtggacctgatcttggccacccctccatttagtcgtcaggagaaa
ttctatgctacgttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatg
tccatggcgcttttatcgaaccttgcccaaggggacacgctagcagcaagggccatagct
gtgcagaagggaagcattggaaacttgataagcttcctagaggatggggtcacgatggcc
cagtaccagcagagccagcacaacctcatgcacatgcagcccccgcccctggaaccgcct
agcgtggacatgatgtgcagggcggccaaggctttgctggccatggccagagtggacgaa
aaccgctcggaattccttttgcacgagggccggttgctggatatctcgatatcagctgtc
ctgaactctctggttgcttctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
