Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101051013
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Entry
101051013 CDS
T04350
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101051013 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbq03041
]
101051013 (PRPF40A)
Spliceosome [BR:
sbq03041
]
Complex A
U1 snRNP components
U1 related factors
101051013 (PRPF40A)
Complex B
101051013 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
101051013
NCBI-ProteinID:
XP_010329561
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSGSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMNQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANANASTSTSNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNLEIYEDVLFFLSKKEKEQAKQLR
KRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRA
LEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFT
NMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTK
RSTTLDAGNIKLAFNSRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKH
SKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKK
KSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSG
SELSEGELEKRRRTLLEQLDDDQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccagggacg
ggagctgagcgtggaggcctcatggtgagtgaaatggagagccatcctccctcgcagggt
cctggggacggggagcggagattgtccggctccagcctctgctccggctcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgccccg
atgggaatgcaccctatgaatcagagagcaaatatgcctcctgtacctcacggaatgatg
ccgcagatgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcg
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatctatg
tggactgaacataaatcacctgatggaaggacttactactacaacactgaaaccaaacag
tctacctgggagaaaccagatgatcttaaaacacctgctgagcaactcttatctaaatgc
ccctggaaggaatacaaatcagattctggaaagccttactattacaattctcaaacaaaa
gaatctcgctgggccaaacctaaagaacttgaggatctcgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagc
agtaaacaagaagagtgcacgacaacatcaacagccccagtccctacaacagaaattcca
acgacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagctgcagca
gcagcagcagcagctgctgctgcggccaatgctaatgcttccacttctacttctaatact
gtcagtggaactgttccagttgttcctgagccagaagttacttccattgttgctactgtt
gtagataatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacc
cctgctattcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatcgaag
caagaaactgtagctgattttactcccaaaaaagaagaggaggagagccaaccagcaaag
aaaacatatacttggaatacaaaggaggaggcaaagcaagcctttaaagaattattgaaa
gaaaagcgggtaccatcgaatgcttcatgggagcaagctatgaaaatgattattaatgat
ccacggtacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatcttgaaatc
tatgaagatgttttgttctttctttcaaaaaaggaaaaggaacaagcaaagcaattgcga
aagagaaactgggaagccttaaaaaacatacttgacaacatggctaatgtaacatactct
accacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagatgag
gagttacaaaacatggacaaagaagatgcattaatttgctttgaagaacacattcgggct
ttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaaaggagacgacag
cgaaaaaatcgggaatccttccagatatttttagatgaattacatgaacatggacaacta
cattctatgtcatcttggatggaattgtatccaactattagttctgacattagattcact
aatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgttgaggat
cttaaagcacgttatcatgatgagaagaagataataaaagacattctaaaggataaagga
tttgtagttgaagtaaataccacttttgaagattttgtagcaataattagttcaactaaa
agatcaactacattagatgctggaaatatcaaattggctttcaatagtcgtgagagattt
gtaaaagagccagcatttgaggacataactctagaatctgaaagaaagcgaatatttaaa
gattttatgcatgtgcttgagcatgaatgtcagcatcatcattcaaagaacaagaaacat
tctaagaaatctaaaaaacatcataggaaacgttcccgctctcgatcggggtcagattca
gatgatgatgatagccattcaaagaaaaaaagacaacgatcagagtctcgttctgcttca
gaacattcttctagtgcagagtctgagagaagttataaaaagtcaaaaaagcataagaag
aaaagtaagaaaaggagacataaatctgactctccagaatccgatgctgagcgagagaag
gataaaaaagaaaaagatcgggaaagtgaaaaagacagaactagacaaagatcagaatca
aaacacaaatcgcctaagaaaaagactggaaaggattctggtaattgggatacttctggc
agtgaactgagtgaaggggaattggaaaagcgcagaagaacccttttggagcaactggat
gatgatcaataa
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