Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101051510
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Entry
101051510 CDS
T04350
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04611
Platelet activation
sbq04820
Cytoskeleton in muscle cells
sbq04926
Relaxin signaling pathway
sbq04933
AGE-RAGE signaling pathway in diabetic complications
sbq04974
Protein digestion and absorption
sbq05146
Amoebiasis
sbq05165
Human papillomavirus infection
sbq05205
Proteoglycans in cancer
sbq05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101051510 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101051510 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101051510 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101051510 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101051510 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
101051510 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
101051510 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101051510 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101051510 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101051510 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
101051510 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101051510 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbq00536
]
101051510 (COL1A1)
Glycosaminoglycan binding proteins [BR:
sbq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101051510 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
101051510
NCBI-ProteinID:
XP_003931313
UniProt:
A0A2K6S139
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MFSFVDLRLLLLLAAAALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEIPEGECCPVCPDGSEATTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP
MGPSGPRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR
PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ
MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPAGFPGAVGAKGEAGPQGP
RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP
QGPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL
PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL
TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV
PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE
QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS
QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD
KGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP
PGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP
AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV
VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA
EGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP
VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP
RGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSF
LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR
DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPNVAQKNWYISKNPKD
KRHVWFGESMTDGFQFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ
TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII
DVAPLDIGAPDQEFGFDVGPACFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccgccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccacccatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgtgatgacgtgatctgtgatgagaccaagaac
tgccccggtgccgaaatccccgagggcgagtgctgtcccgtctgccccgacggctcagag
gccaccaccgaccaagaaaccaccggcgtcgagggccccaagggagacactggcccccga
ggcccaaggggacccgcaggcccccctggccgagatggcatccccggacagcctggactt
cccggaccccccggaccccccggacctcccggaccccctggcctcggaggaaactttgct
ccccagctgtcctatggctatgatgagaaatcaacaggaggaatttccgtgcctggcccc
atgggtccttctggtcctcgtggtctccctggcccccctggttcacctggtccccaaggc
ttccaaggtccccctggtgagcctggtgagcctggagcttcaggtcccatgggtcctcga
ggtccccctggcccccctggaaagaacggagatgatggggaagctggaaaacctggtcgt
cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggc
ctccctggaatgaagggacacagaggcttcagtggtttggatggtgccaaaggagatgct
ggtcctgctggtcccaagggtgagcctggcagccctggtgaaaatggagctcctggtcag
atgggtccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt
gctcgtggaaatgatggtgctactggtgctgccggcccccctggtcccactggccccgct
ggtcctgctggcttccctggtgctgttggtgctaagggtgaagctggtccccaagggccc
cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggt
gctgctggccctgctggaaaccctggtgctgacggacagcctggtgctaaaggtgccaat
ggcgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc
cagggccccagcggccctcctggtcccaagggtaacagcggtgaacctggtgctcccggc
agcaagggagacactggtgccaaaggagaacccggccctgttggtgttcaaggaccccct
ggccctgctggagaggaaggaaagcgaggagcccgaggtgaacccggacccactggcctg
cccggaccccctggcgagcgcggtggacctggtagccgtggattccctggcgccgatggt
gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa
ggatctcctggtgaagctggtcgtcccggtgaagctggcctgcctggtgccaagggtctg
actggaagccctggcagccccggtcctgatggcaaaactggcccccctggtcccgctggt
caagatggtcgccccggacccccaggcccccctggtgcccgtggtcaggctggtgtgatg
ggatttcctggacctaaaggtgctgctggagagcccggcaaggctggagagcgaggtgtt
cctggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga
ccccctggccctgctggtcccgctggcgagagaggtgaacaaggccctgctggctccccc
ggattccagggtctccctggacctgctggtcctcccggtgaagcaggcaaacctggtgaa
cagggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagaggc
ttccctggcgagcgtggtgtgcaaggtccccctggtcctgctggtccccgtggggccaac
ggtgctcccggcaacgatggtgctaagggtgatgctggtgctcctggagcccccggtagc
cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggccttccaggg
cctaagggtgacagaggtgatgctggtcccaaaggtgctgatggctctcctggcaaagat
ggcgtccgtggtctaactggccccattggtcctcctggccctgctggtgcccctggtgac
aagggtgaaactggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga
gaccgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgac
ggccaacccggtgctaaaggcgaacctggagatgctggtgctaaaggcgatgctggtccc
cctggccctgccggacccgctggcccccctggccccattggtaacgttggtgctcctgga
cccaaaggtgctcgcggcagcgctggtccccctggtgctactggtttccctggtgctgct
ggccgagtcggtccccctggcccctctggaaatgctggaccccctggccctcctggtcct
gctggcaaagaaggcggcaaaggtccccgtggtgagactggccctgctggacgtcctggt
gaagttggcccccctggcccccctggccctgctggcgagaaaggatcccctggtgctgat
ggacctgctggtgctcctggtactcctggacctcaaggtattgctggacagcgtggtgtg
gtcggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggt
gaacctggcaaacaaggtccctctggagcaagtggtgaacgtggtccccctggtcccatg
ggcccccctggattggctggaccccctggtgaatctggacgtgagggagctcctggcgct
gaaggttcccctggacgtgatggctctcctggccccaagggtgaccgtggtgagaccggc
cccgctggaccccctggtgctcctggtgctcctggtgcccctggccccgttggccctgct
ggcaagagtggtgaccgtggtgagactggtcccgctggtcctgccggtcctgttggccct
gttggcgcccgtggccctgctggaccccaaggcccccgtggtgacaagggcgagactggc
gaacagggtgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct
ggccctcccggctctcctggtgaacaaggtccctctggagcctctggtcctgctggtccc
cgaggtccccctggctctgccggtgctcctggcaaagatggactcaacggtcttccaggc
cccatcgggcctcccggtcctcgtggtcgcactggtgatgctggtcctgttggtccccct
ggccctcctggccctcctggtccccctggtcctcccagcggtggtttcgacttcagcttc
ctgccccagccacctcaagagaaggctcacgatggtggccgctactaccgggctgatgat
gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag
cagatcgagaacatccggagccccgagggcagccgcaaaaaccccgcccgcacctgccgc
gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa
ggctgcaacctggatgccatcaaggtcttctgcaacatggagactggtgagacctgcgtg
taccccactcagcccaacgtagcccagaagaactggtacatcagcaagaaccccaaggac
aagaggcacgtctggtttggcgagagcatgacggacggattccagtttgagtatggcagc
gagggctccgaccctgccgatgtggccatccagctgaccttcctgcgcctgatgtccacc
gaggcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag
actggcaacctcaagaaggctctgctcctccagggctccaacgagatagagatccgcgcc
gagggcaacagccgcttcacctacagcgtcaccgttgatggctgcacgagtcacaccgga
gcctggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatc
gatgtggcccccttggacattggtgccccagaccaggaattcggctttgacgttggccct
gcctgcttcctgtaa
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