Shewanella carassii: TUM17387_17050
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Entry
TUM17387_17050 CDS
T07543
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
scaa
Shewanella carassii
Pathway
scaa00020
Citrate cycle (TCA cycle)
scaa00480
Glutathione metabolism
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01120
Microbial metabolism in diverse environments
scaa01200
Carbon metabolism
scaa01210
2-Oxocarboxylic acid metabolism
scaa01230
Biosynthesis of amino acids
Module
scaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scaa_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TUM17387_17050 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TUM17387_17050 (icd)
Enzymes [BR:
scaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
TUM17387_17050 (icd)
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GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
BCV66346
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Position
1892227..1894452
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AA seq
741 aa
AA seq
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MTDKNPTIIYTQTDEAPALATLSLLPIIKTFTQAAGINVETRDISLSGRVIAAFPERLTE
AQRIGDHLAELGELATQPEANIIKLPNISASIPQLQACIKELQAKGYDLPDYPAEAKSDE
EREIKARYDKIKGSAVNPVLREGNSDRRAPTSVKNYARKHPHSMGAWSKDSKSHVAHMQQ
GDFYGSEQSVTLKEADTVNIVLEQNDGGQLVLKQGLELLAGEIIDAAVMSKRELTAFFER
EIEAARQEDVLLSLHLKATMMKVSDPIMFGHAVKVFYKDVFAKHGETLRELGVDVNNGLG
DVYAKIAKLPAEQKAAIEADIAAVYQSRPELAMVNSDKGITNLHVPSDVIIDASMPAAIR
SSGQMWGPDGQLKDTKALIPDRCYAGVYQETISFCKEHGAFDPATMGSVPNVGLMAQKAE
EYGSHDKTFEIPAAGTVKVLDKAGNVLMSHAVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDENRAHDAQVIAKVNAYLPEHDTDGLELHIMSPEKAARFSLERIKAGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFEEENH
LRWDSLGEFLALGASLEHLSQTTANAKAQVMADCLDQAIGQFLDNNKSPSRKVGQLDNRG
SHYFLAQYWASALAKQDKDAELKAYFAPLAEGLVAAEEQIVAELNGAQGGAVELGGYYKL
DPVKAEQAMRPSASLNRLLSA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaaaccccactatcatctatacgcagacagatgaagcgccggctttggcg
accttatctctactgcctatcatcaaaacctttacccaggcagccggcatcaatgtcgaa
acccgcgatatttctctttccggccgtgtgattgccgcttttcccgagcgtctgaccgaa
gcgcagcgcatcggtgatcatctggcggagcttggtgaactggcgactcagcccgaagcc
aatattatcaaactgcccaatatcagcgcctccattcctcagctgcaggcttgtatcaaa
gagttgcaggccaaaggttatgatctgcccgactatccggccgaagccaaaagcgatgaa
gagcgggaaatcaaggcccgttatgacaagatcaagggcagtgcggtaaaccctgtgctg
cgtgaagggaactcagaccgccgcgccccgacttcggtcaagaactatgcccgtaagcac
ccgcattcaatgggtgcctggagcaaggactccaagtctcatgtggctcatatgcaacaa
ggggatttctacggcagcgagcaatccgttaccctcaaagaggccgatactgtcaacata
gtgctcgaacaaaacgatggtggccaactggtgcttaagcaggggcttgagttgctggcc
ggtgaaatcatagatgcggccgttatgagcaagcgcgaactgaccgccttcttcgagcgc
gaaattgaagccgcccgccaagaagatgtactgctgtcgctgcatctgaaagccaccatg
atgaaagtgtccgatccgattatgttcggccatgcggtgaaggtgttctacaaagatgta
ttcgccaaacacggtgaaactttgcgtgagctgggtgtggacgtcaacaatggtctgggt
gatgtctatgccaagatagctaagttgccggccgagcagaaagcggccattgaagccgat
atcgccgccgtctaccagagccgccctgagctggcgatggtgaactcagacaagggcatc
accaaccttcacgtgccaagcgatgtgattatcgatgcttccatgcctgctgctatccgc
tccagtggtcagatgtggggcccggatggtcagttgaaagataccaaggcactgatcccg
gatcgttgctatgccggtgtttaccaggaaaccatcagtttctgtaaagaacatggcgcc
ttcgatcctgcgaccatgggtagtgtgccaaacgtgggactgatggcccagaaggccgaa
gagtacggtagccatgacaagacctttgaaatccctgcagccggtacggtcaaagtactg
gacaaggctggcaatgtgcttatgtcccacgccgttgaagccggtgatatctggcgcatg
tgccaagtaaaagatgcaccaattcgcgactgggtcaagctggccgtacgccgcgccaga
ctgagcaacaccccggcggtattctggctggatgaaaatcgtgcccacgatgcccaggtg
atcgccaaggtgaatgcctacctgcctgagcatgataccgatgggcttgagttgcacatc
atgtcacctgaaaaggcggcccgtttctcccttgaacgtattaaagccggtaaggacacg
atttcggtaacaggtaacgtgctgcgtgactacctcaccgacttgttccctatccttgag
ctgggtaccagtgccaagatgctgtcaatcgtcccgctgatgaatggtggcggtctgttc
gagacaggtgccggcggcagtgcacccaagcatgtacagcagtttgaagaggaaaaccac
ctgcgttgggattctctgggcgagtttctggcgttgggagcctcactcgagcacctaagc
cagacgacggccaatgccaaggctcaggtgatggctgattgcctggatcaggcaataggg
cagttcctggataacaacaagtcaccatctcgtaaagtggggcagttggataaccgcggc
agtcattacttcctggcgcaatactgggccagcgcgttggccaagcaggacaaggatgcc
gagctgaaagcttattttgcgcctctggccgaaggcctggtggctgcagaagagcagata
gtggctgaactcaatggtgctcaggggggcgcggttgaactgggtggttactataagctg
gatcctgttaaagccgagcaggctatgcgcccaagtgccagcctgaatcgccttctgagc
gcttga
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