Sphingomonas cannabina: LZK98_06345
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Entry
LZK98_06345 CDS
T08607
Name
(GenBank) LamG domain-containing protein
Organism
scab
Sphingomonas cannabina
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Motif
Other DBs
NCBI-ProteinID:
UIJ46566
LinkDB
All DBs
Position
complement(1305064..1308870)
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AA seq
1268 aa
AA seq
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MVRRHGSMLLTIGAAALLTAGPARADDAPGLLFHVSADTSLTADRAGGDAVPNFASKVAI
DPTGKTGGAIRWEDDGYVTWNAPGNIQARRGTLAFFWRSRYPVGEAPFVLFRVGFADHSS
WDMAFLRIDWNGHGFDAFVTDTNLARERVSFRMDALPAPDTWHHIAFVWDEAVGVRLYVD
GKEVARKDGQAVLDSGLDQFGLAGRVIAPHQVQSRYNFMRGSDLDDIRVYDRMLPAADIA
ALAGGGAPSGAAPLDAAGERRAFLHRYGFDKESPPALTAASTRIRKVEFADARDLKQWMW
KGVDGIPETTWPGVYNRSRLPGRNDYFTLPDWNTYVEGGKAYELTIPPGEAVNRVEIRGA
AYGGLDYAADGKSYARLARRPQGIEKSIHSFSERTGGRLRFTNIAQETPIQEIWAYDVQP
GAEPEGTVKLSYTVDSKAAPGFAALAGLNAFIAGRYPPAERATVVALPASRGGAAVGAGS
AAAAGEARRIEDAAPLVHILIPSGFSAAAPDRPLARAWNYTWANAHDGLDGIALDMPALK
VAPNRDGLIPLNIRVKDPIWPERDMIDVSVSVRPGEARTLWLDLRDRILTEDSLYLAIAS
AAPDFGPASIDGMKIRLVFKDRAAAKAEHVADRFNQVRDNWGFLVEEHTASAREAMYRRV
KADITDLLRVDPDNLEGRRYWADISYGATGMPPFTQPVPPAGVPLWAFRQLEDLKLTRRF
VDWWIDNRQVPYGDFGGGISDDTDLTQQWPGLALMGVEPDKINASLRALSDAVYANGMNT
GGLGTITTDELHAYEEGMNSDAERLYLNWGEPRAVERLMATTKALTGIIQRNPAGHMHFA
SNWYGGTKVYREGPWEWQKPYSFVVMHAPILMGVYNGNPTARGLVTGVIDGWLAHGKQDA
KGAWSYPNEINWRTDAERAGDGGGVATPYQSVWAAWRFTGDDRYLAPILSRVAKGGPASL
GDLNENVVAALGRTNDWGKALAGQPGDFARVAGWDATGDKRLLETLHADAIEDKTQHEYM
YTEGHWWSDRVDQPNEFLQRERLGGIALKRNQTYPGNAVSWRFANPGAAEQVAILVPGAT
RERFKVIAYNMSDVAQPATMTAWNVAAGRWTMTAGTSAANGDTADGPPTATEVTLERSAS
VAVTFAPRTTTVLEFALKSPGTPPESRPDLGIGADDVRRQGRTVSVTVHSLGAVEAAGGT
AMLEDAAGKPVASVPLPTLAAPLDLTPKAATVRLTIPAGVHPAGLRVRVALPDEAPEVTR
LNNAVPLQ
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccgtcacgggtcgatgctgctcacgatcggcgctgcggcgttgctgacggcc
ggtccggcacgcgccgacgacgcgccggggctgctcttccacgtctcggcggataccagc
ctcaccgccgaccgcgccggtggcgatgccgtccccaatttcgcaagcaaggtcgcgatc
gaccccaccggcaagacgggcggcgcgatccggtgggaggacgacggctacgtcacctgg
aacgcgccgggcaacatccaggcccggcgcggcacgctcgccttcttctggcggtcgcgc
tacccggtcggcgaagcgccgttcgtgctgttccgcgtcggcttcgccgatcattcgagc
tgggacatggcgttcctgcggatcgactggaacggccacggcttcgacgccttcgtcacc
gacaccaacctcgcgcgcgagcgggtgtcgttccggatggatgcgctgcccgcacccgac
acctggcaccacatcgccttcgtctgggacgaggcggtcggggtgcggctctacgtcgac
ggcaaggaagtggctcgaaaggacgggcaggcggtgctcgacagcggcctcgaccagttc
ggcctcgccgggcgggtgatcgcgccgcatcaggtgcagagccgctacaatttcatgcgt
ggctcggacctggacgacatccgcgtctacgaccggatgctgccggccgcggacatcgcc
gcgctcgccggcggcggcgctccgtcaggcgcggccccgctcgacgcggcgggcgagcgg
cgcgcctttcttcatcgctatggcttcgacaaggaatcgccgcccgcgctcaccgccgcc
agcacgcgcatccgcaaggtcgagttcgccgacgccagggacctcaagcaatggatgtgg
aagggcgtcgacggaatcccggagacgacctggcccggcgtctacaaccgctcgcgcctg
cccggccgcaacgactatttcaccctgcccgactggaatacctatgtcgaaggcggcaag
gcctatgagctgacgatcccgcccggcgaggcggtcaatcgcgtcgagatccgcggcgcc
gcctatggcggcctcgactatgcggcggacgggaaaagctacgcccggctcgcccggcgg
ccgcaggggatcgagaaatcgatccacagcttctccgagcgcaccggcgggcggctgcgc
ttcaccaatatcgcgcaggaaacgccgatccaggaaatctgggcctatgatgtccaaccg
ggcgcagagcccgagggtacggttaagctcagctacaccgtcgacagcaaggccgcgccg
ggcttcgccgcgctcgccgggctcaatgccttcatcgccggccgctatccgccggcggag
cgggcgacggtggtggcgctgccggcgagccgagggggggcagcggtcggcgcaggcagt
gcggccgcagctggcgaggcgcggcgcatcgaggatgcggcgccgctcgtccatatcctg
atcccgtccggcttcagcgccgccgcacccgaccggccgctggcgcgcgcatggaactat
acctgggcgaatgcgcatgacgggctggatggcatcgccctcgacatgccggcgctcaag
gtggcgccgaaccgcgacggcctcatcccgctcaacatccgcgtcaaggacccgatctgg
cccgagcgcgacatgatcgacgtctcggtctcggtccgcccgggcgaggcgcgcactttg
tggctggacctgcgcgaccgcatcctgaccgaggacagcctctatctcgccatcgccagc
gcggcgcccgatttcggtcctgcttcgatcgatgggatgaagatccggctggtgttcaag
gaccgtgccgccgccaaggccgagcatgtcgccgaccgcttcaaccaggtccgcgacaat
tggggcttcctggtcgaggagcataccgcctctgcccgcgaggcgatgtaccgccgggtg
aaggccgatatcaccgacctgctccgcgtcgatcccgacaatctcgagggccggcgctac
tgggccgacatcagctacggcgcgacgggaatgccccccttcacccagccggtaccgccc
gccggcgtgccgctgtgggcgttccggcagctcgaggacctgaagctcacgcgccgcttc
gtcgactggtggatcgacaaccggcaggtgccctacggcgatttcggcggcggcatctcc
gacgacaccgacctgacccagcaatggccgggcctggcgctgatgggcgtcgagcccgac
aagatcaacgcgtcgctgcgtgccctctccgatgccgtctacgcgaacggcatgaacacg
ggcgggctcggcaccatcaccaccgacgagcttcacgcctatgaggaggggatgaacagc
gacgccgagcggctctacctcaactggggcgagcccagagcggtcgagcggctgatggcg
acgaccaaggcgctgaccggcatcatccagcgcaatcccgccggccacatgcacttcgcc
tccaactggtacggcggcaccaaggtttatcgcgaagggccgtgggagtggcagaagccc
tacagcttcgtcgtgatgcacgccccgatcctgatgggcgtctacaacggcaacccgacc
gcgcggggcctcgtcaccggcgtgatcgacggctggctggcgcatgggaagcaggacgcc
aagggggcctggagctaccccaacgagatcaattggcgcaccgacgccgagcgcgccggc
gacggcggcggagtggcgacgccctatcagtccgtatgggcggcgtggcgcttcacgggg
gacgacagatatctggcgccgatcctctcgcgcgtggcgaagggcgggccggcatcgctc
ggcgatctcaacgagaacgtcgtcgccgcgctcggacggacgaacgactggggcaaggcg
ctcgcgggccagccgggcgacttcgcgcgcgtcgccggctgggatgcgaccggcgacaag
cgcctgctcgagacgctccacgccgacgcgatcgaggacaagacgcagcacgaatatatg
tataccgaggggcattggtggtccgaccgcgtcgaccagcccaatgaattcctccagcgc
gagcggctcggcgggatcgcgctgaagcgcaaccagacctatcccggcaacgcggtgagt
tggcgcttcgccaatccgggcgcggccgagcaggtcgcgatcctggtgccgggcgcgacg
cgcgaacggttcaaggtgatcgcctacaatatgagcgacgttgcccagccggcgacgatg
acggcgtggaacgtcgccgccggccgctggacgatgacggcgggaaccagcgccgccaac
ggcgacaccgccgacggaccgcccaccgcgaccgaggtgacgctggagcgcagcgcgtcg
gtcgcggtgaccttcgccccacgcaccaccaccgtgctggagttcgcactcaagtcgccc
ggcacgccgccggaaagccggccggacctcggcatcggcgccgacgacgtgcggcggcag
ggccggacggtctccgtcaccgtccacagcctcggcgcggtcgaggcggccggcggaacg
gccatgctggaggatgcagccggcaaaccggtggcgagcgtgccgctgccgacgctggcc
gcgccgctcgacctgacgccgaaggccgcgaccgtgcgcctgacgatccctgccggcgtg
cacccggcagggctcagggttcgcgtcgcgctgcccgatgaggcgccggaggtgacccgg
ctcaacaatgcggtgccgctccaatga
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