Streptomyces californicus: I6J39_26865
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Entry
I6J39_26865 CDS
T07611
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scal03016
]
I6J39_26865 (truB)
Enzymes [BR:
scal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I6J39_26865 (truB)
Transfer RNA biogenesis [BR:
scal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6J39_26865 (truB)
Prokaryotic type
I6J39_26865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QRV30520
LinkDB
All DBs
Position
6127597..6128496
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AA seq
299 aa
AA seq
DB search
MTEQTTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVQRAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEITSSADASGVTREGIDAGVAALTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFRVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLDAARTLDQHQEELTVMPVAEAAD
AAFPRWDVDEKRAKLLLNGVRLDMPAYPPGPVAVYGPDGAFLVLVEEEKGKAKSLAVFA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagaccaccacgccggacggccttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtcgtcgccaagatgcgcggcatcgcccgcacgcgacgcgtcggccac
gccggcacgctggacccgatggcgaccggggtcctcgtgctcggcgtccagcgggccacg
aagctcctgggccacctcgccctgaccgagaaggagtacctcggtacgatccggctcggc
caggacaccgtcaccgacgacgccgagggcgagatcacctcgtccgccgacgcctccggc
gtgacccgggagggcatcgacgccggggtggccgcgctgaccggcgcgatcatgcaggtc
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgcccgggtgcgcggc
ggcgaggagttcgagatcccggcccgcccggtgaccgtctcctccttccgggtctacgac
gtccgcgaggccgtcgccgaggacggcacccccgtgctcgacctggtcgtctccgtcgtc
tgctcctcggggacgtacatccgggccctcgcccgcgacctcggcgccggactgggcgtc
ggcggccacctgaccgcgctgcgccgcacccgggtcggcccgtacggcctcgacgcggcc
cggacgctcgaccagcaccaggaggagctgaccgtcatgccggtcgccgaggcggcggac
gcggccttcccccgctgggacgtggacgagaagcgcgccaagctgctcctgaacggcgta
cggctggacatgcccgcgtacccgccggggccggtcgcggtctacgggccggacggggcg
ttcctcgtgctcgtcgaggaggagaagggcaaggccaagagcctcgccgtcttcgcctga
DBGET
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