Struthio camelus australis (South African ostrich): 104148137
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Entry
104148137 CDS
T08512
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104148137 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104148137 (MBD4)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104148137 (MBD4)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104148137 (MBD4)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104148137 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
104148137
NCBI-ProteinID:
XP_009679450
Ensembl:
ENSSCUG00000013086
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
GRTARKYDVCFVSPEGHKLRSKGALVNYFRKTGETTLKAEDFDFTAPSRSSTRSGAKRCS
SKAVGAGLQEEDRQSQAQDLSVQNGEEDKIHKVQTGNERLGDVAATTTCSSKDLVVKEVK
PEDCLKTKKKGAVGKSVQSKKTRKSSEKKNADNTRTKRQRKVCNKQETECIQNKKFCRKK
DIGVPNSQGRDDHNTDPVDAGKRKTLLTEELLISGSQSDIQLGSVTAPLEKELKSPAELE
CIEKSFNEASSAKSEEKTDELEIGKETDQVNLDNQDFESNTETDVNILQPCDKKILTEVK
MLQEESIPRTQVEKRKTSPYFSSKCCKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPW
KLLIATIFLNKTSGKAAIPVLWEFLKKYPSPEITRTADWKEMSELLRPLGLYELRAKTII
KFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHAWLWENHEKL
SID
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ggaagaacagcaaggaagtacgacgtgtgtttcgtcagtcccgaaggacataagctaaga
tcaaaaggtgcgcttgtgaattattttcgtaaaactggagagacaactctaaaagcagaa
gattttgattttactgcgccatctcggagcagcacccgttcaggggccaaaagatgcagc
tcaaaagctgtgggagctggtttacaggaggaggatcgtcagagtcaagcacaggacctt
agtgtacagaatggtgaagaagataaaattcataaggttcaaactggaaatgaacggctg
ggagatgttgctgctacaaccacttgcagtagtaaggatttggtcgtgaaagaagtaaaa
ccagaggactgtttgaaaaccaaaaaaaaaggggcagttggaaaaagtgttcagagtaag
aaaactagaaagagctcagaaaagaagaatgcagataatacccgaaccaaaagacagaga
aaagtatgtaacaaacaagaaactgagtgcattcagaacaagaaattctgcagaaagaag
gacataggtgtccctaacagtcaagggagagatgaccacaacacagaccctgtggatgca
ggaaaaagaaaaactcttttaacagaggaattactgatttctggatcacagtcagacata
cagctaggatcagtcacagctcccttggaaaaggagttgaagagcccagctgagctggag
tgcatagagaaaagttttaatgaagcatcttctgcaaagtctgaggagaagactgatgaa
ctggaaatagggaaagagacagatcaagtgaatctagataaccaggattttgaatccaac
actgaaacggatgttaacattttgcagccttgtgacaagaaaatcctcacagaagttaaa
atgctgcaagaagaatctattccacgaacacaggtggaaaagaggaaaacaagtccgtat
ttttcaagtaaatgctgtaaagaagctccgagcccacctagaaggaaggccttcagaaaa
tggactcctccacgttctccttttaacttggtccaagaaactcttttccatgatccatgg
aaactcctcattgcaactatatttctcaataagacctcaggtaaggcggcaattcctgtg
ctctgggagttccttaagaaatatccttctcctgaaataacgagaactgcagactggaaa
gaaatgtcagagttgctcagacctctcggcctctatgaactcagagcaaaaactataatc
aagttttcagatgagtatctgaccaagcagtggaggtaccccattgaactgcacgggatt
ggaaaatacggaaacgactcttacagaatcttctgtgtcaatgaatggaaagaggtgcag
ccacaggatcacaagttaaacatatatcatgcatggctctgggaaaatcatgagaaacta
agtatagattaa
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