Struthio camelus australis (South African ostrich): 104149238
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Entry
104149238 CDS
T08512
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03420
Nucleotide excision repair
scam04115
p53 signaling pathway
scam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104149238 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104149238 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104149238 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104149238 (DDB2)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104149238 (DDB2)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
104149238 (DDB2)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104149238 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104149238
NCBI-ProteinID:
XP_009681055
Ensembl:
ENSSCUG00000016918
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MALENQPKDKKHVRTHEHQLAELAKSAGKRKQDYEEIENEPQAKRLFVRKTSKPPEKIGW
SRGGSMIRNTRVLLHQLERQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRT
ASPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLNKTCFIKGKGPGDSLGDIKFSP
YETVKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHEYHDVCCWYCSVDVSASCRAVVTG
DNVGHVVLLSTSGEEIWKLKLHKKKVTHVELNSRCEWLLATASVDQTVKIWDLRNIKDKT
NFLHVLPHDKPVNAAYFSPTDGAKLLTTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLT
PIKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDIFDGNTGEMVCQLHDPNASGIISLN
KFNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGNRSLSRRGGQRQANPGT
SKVKTKLLSWEVEEAKTKNKDSKSQGRKQKGKDL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctctggagaaccagcccaaggacaagaagcatgtgaggacacatgagcatcagcta
gcagaactggcaaaatcagctgggaaaaggaaacaagactatgaagaaatagagaacgag
ccacaagcaaagaggttgtttgtgagaaaaacgtccaaacccccagagaaaataggttgg
agtagaggtgggtccatgatcagaaacaccagagtccttttgcatcagctggagaggcag
tgcagcattgtccattatgtctaccagaacatgctgggaggctctatccgggcacagctc
aggcagtgtctgcagctgccctttctgcgttctcttgcctcgtaccgcctttttcgaaca
gcaagtcccttcgacaggagagtgacttgcctggaatggcatccgacacaccccagtact
gtagctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttaataaa
acttgcttcattaaagggaaagggccaggagattctctcggagacatcaagttcagtccc
tatgagacagtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggacctt
gagggcagagcggtgcaggtgatctcccgtgccccagactgtggccatgagtaccatgat
gtttgttgctggtactgcagcgttgatgtgtctgcaagctgccgtgctgtggtgacgggc
gataatgtaggacacgtggtcctgctcagcacttctggtgaagagatttggaagctgaaa
ttacacaagaagaaagtgactcatgtggagcttaactctcgatgtgagtggttgttggcc
acagcctctgtggaccagacagtcaaaatctgggacctgaggaatatcaaggacaaaaca
aattttctccatgtgcttcctcatgacaaacctgtcaatgcagcttactttagcccaaca
gatggtgccaagctcctgaccacagaccagcgcagtgaaatcagggtttactcatcttca
gactggaccaagccacagcatctgatcccacatccgcatcggcagttccagcacctcaca
cctatcaaggctacgtggcaccctcgctatgacctcattgtagcaggtcgctacccagac
cctaagttcccagggtatacagtgaatgaactgcggactgtggatatatttgatggaaac
accggagagatggtgtgtcagctccatgacccgaatgcatctggtataatctcgctcaat
aaattcaaccctatgggagacacactggcttctggcatgggctttaatattctgatctgg
agccgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacag
gggattggaaaccggagtttgtccagacgtggagggcaaaggcaggcaaaccctgggaca
agcaaagtcaaaactaagttactgtcttgggaagttgaggaggcaaaaacaaagaacaaa
gactccaaatcacagggaaggaagcaaaaagggaaggatctatag
DBGET
integrated database retrieval system
