Serinus canaria (common canary): 103813991
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Entry
103813991 CDS
T05755
Symbol
SYNPO2L
Name
(RefSeq) synaptopodin 2-like protein
Organism
scan
Serinus canaria (common canary)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
Motif
Other DBs
NCBI-GeneID:
103813991
NCBI-ProteinID:
XP_009085695
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MGAEEEMLITLSGGAPWGFRLQGGSEQKRPLQVSKIRKRSKACRGGLWENDVLVSINGKS
CAGLSHANAMQIIDSSNGMLNIRVKRTVGGDQTGPWLQRSPSPGQRVLSPPSVPSPSAQL
LSSEPAGAPATTQPSQPWRSQRHLESLTSPPDSEAYYGETDSDADNVAQEKQRRARKKSP
RSPPDSTTGRVDTPQEEVSLSEQSGYESMPEAAQGGAELVSSSGVAKREIVCLPGSRTDT
PFSDSEGQLRPPSAEGREPSPEAMLLPHATKAIRAERHLIPMVGPVEHPIDEDLTTTYTE
KAKQAKLHRHESIQEKNVKEAKTKCRTIASLLTDAPNPHSKGVLMFKKRRQRAKKYTLVS
FGSVDEDRSYEEEDGVFPTSESEFDEEGFSDARSLTNHSDWDNTYLDIEKSKSDSEQKEE
KQKGLSEASGKGARLFEQQRERAGKYTVEKTPVQKSPALAPAAQPNQGTVNGDMPVPEKA
DNVPLSIHLEAVQVPSKQPAPTQLLTAPSPTFFPPPPSTPDPFSASSTSMFNRSARPFTP
GFSGQRPATSSVIFRPPAPKKPTESLGGQSTVVPPFSPLVPGTPANAPVPTQRGPVSSST
SLYIPAPGRPTSPLESQPKGGGSASEVKPSANTARTSTTSIFLSTPSKPGGDVASAASQP
RVPGTASSSLYISPAPSQHMRSSSPVPKQPSPAITPAMPRPPSEPLTSREQRIAVPAPRT
GILQEARRRGNKKPMFSKIEEKKKNSPNPELLSLVQNLDEKPKGDHPAAGFESGPEEDFL
SLGAEACNFMQSSGRKFKTPPPVAPKPQQDAGLVNGAQDMPQLKGKGAELFAKRQSRMDK
FVVETTPKPDYKARTPSPSPSLPSCWKYSPNIRAPPPIAYNPMHSPFYPLAASKSQASKA
ESKVKKAPGQKSGIKVIDLMRHQPYQLKSAMFCFGDPPSPSTQTTPGQPTPQASSSFMAA
KQVPVKMAKTQEIRRFSTPAPMPASSSLAPTVLVPRSATTLDEPLWRTEMASSAPATPAP
FQVELSPSPKPYQSSPEPGQVGQGPPPNSASASRFQVARPKFSAARTGMQANVWRPSFGH
H
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgaagaagaaatgctcatcactctgtctggaggtgccccctggggcttccgc
ctgcaagggggttcagagcagaaaagaccccttcaagtgtcaaagattcgaaagagaagc
aaagcgtgccgtggaggcctgtgggaaaatgatgtcctagtatctatcaatgggaagtca
tgtgctggcctgtcccacgctaatgccatgcagatcatcgattcctccaacggcatgctc
aacatccgcgtgaaaaggacagttggtggggaccagactggcccgtggctccagcgttcc
ccttctccagggcagcgagtgctctctccaccatccgtacccagcccctcagcacagtta
ctcagctctgaacctgcaggagccccagccactactcagccctcacagccatggaggtca
cagaggcacctggagagcctcacatccccaccggacagcgaggcctactatggtgagaca
gacagcgatgctgacaacgtggcgcaggagaagcagcgccgcgctcgcaagaagagccca
cgctccccacctgacagcaccaccggcagggtggatacgcctcaggaagaggtgtccctg
tctgaacagagtggctatgagagcatgccagaggctgctcaggggggagcagagctggtc
agctccagtggagtggccaagagggagattgtctgcctgcctggcagtcgcacagacact
ccattctcagacagcgagggacagctgcggccaccgtcagcagagggtcgggagccttct
ccagaggcaatgctcctgccccatgccaccaaggctatccgagcagaacgccatctcatc
cccatggtggggccagtggaacatccgattgatgaagacctaaccaccacttatacagag
aaagccaagcaggccaagctccaccgccacgaaagcatccaggagaagaatgtaaaagaa
gccaaaaccaagtgcagaaccattgcatccctgctgacagatgcacccaacccccactcc
aagggggtgctgatgtttaagaaacgcaggcagagggctaagaagtatacattggtaagc
tttggcagtgttgatgaagaccgctcctacgaggaggaagacggagtttttccaaccagt
gaatctgaatttgatgaggaaggtttctctgatgcccgaagcctaactaatcactcagac
tgggacaacacttacctagacattgaaaaatccaaatctgactctgaacagaaggaagag
aaacaaaaaggtttgagtgaggcctcaggtaaaggagcaagattatttgagcagcagagg
gagcgggctgggaagtacacagttgagaaaacaccagtgcagaagagcccagcacttgcc
ccagctgcccagccaaatcagggcacagtgaacggagatatgcctgtgccagagaaggca
gacaatgtgcccctcagcatccacctggaagctgtgcaagtgcccagcaagcagccagcc
cccactcagctcctgactgcccccagccccactttcttccctcctcccccaagcacccct
gaccccttctctgcaagttcaacaagcatgttcaacaggtctgcacggccctttactcct
ggcttttctggtcagcgtccagcaacatcctctgtcatctttaggccacctgcacctaaa
aaacccactgaaagtctgggtgggcaaagcacagtggttccccctttctcacctctggtt
ccaggaacacctgccaatgcaccagtgccaacacagcgtggtccagtcagctcctccaca
tctctgtatattcctgcaccaggaagaccaacatcaccactggagtcacagccaaaaggt
ggaggaagtgcttcagaggtcaagccttctgccaacactgcccggacatccaccacctct
atctttctgtcaactccctcaaagccaggaggggatgtggcctctgcagcatcccagcca
cgagtccctggaacagcctcttcttcgttgtatattagtccagcaccatcacagcacatg
agaagcagttcccctgtgccaaaacagccttctcctgccatcaccccagcaatgccacga
cctccttcagagcccttaacctccagggagcagaggattgctgtgccagctccccgcaca
ggcatcctgcaagaggctcgccgacggggcaacaagaaacccatgttcagtaagattgag
gagaagaagaagaattcacccaaccctgagctcctgtctctggtgcagaacctggatgag
aagccaaagggtgaccaccctgcggcaggctttgagtctgggcctgaggaggacttcctc
agcctgggtgctgaggcctgcaacttcatgcagtcctcaggccgcaagttcaagacccca
cctccagtggcccccaagcctcagcaagatgctggattggtaaatggggcccaggacatg
cctcagctcaaaggcaaaggggcagagctctttgccaaacgccagagccgcatggacaaa
tttgtggtggaaacaacaccgaagccagactacaaggccaggaccccttctccatcccct
tctctaccctcatgctggaaatattcacccaacatccgggctccccctccaatagcttac
aacccaatgcattcccctttctatcccctggcagccagcaaatctcaggctagcaaagca
gagagcaaagtgaaaaaggcacctggccagaaatcagggatcaaggtcattgatttaatg
cgccaccagccctatcaattgaagtcagccatgttctgttttggggatcccccaagcccc
agcactcagactactcctggtcagccaaccccacaggctagctcatccttcatggcagcc
aagcaggtccctgtgaaaatggccaagacccaggagattcgtcgcttctccactccggct
cccatgccagcctccagcagcctggcacccactgtgcttgtgccccgctcagccaccact
ctggatgagccattgtggagaacagaaatggcctcttctgcccctgctacaccagcaccc
ttccaggtggagctcagcccctcccctaagccatatcagagctccccagagcctggacag
gtgggacagggacctcctccaaactcagcctctgcctctcggtttcaggtggccaggccc
aaattctctgcagcaagaacaggcatgcaggccaatgtgtggaggccaagttttggccat
cactga
DBGET
integrated database retrieval system