Serinus canaria (common canary): 103818733
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Entry
103818733 CDS
T05755
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
scan
Serinus canaria (common canary)
Pathway
scan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103818733 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103818733 (TAF4)
03036 Chromosome and associated proteins [BR:
scan03036
]
103818733 (TAF4)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103818733 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
103818733 (TAF4)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103818733 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
103818733
NCBI-ProteinID:
XP_009091375
UniProt:
A0A8C9NP79
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVVAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAASATQVIKSESPKT
IVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggttcggaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaaccccgctcctgcacctgctgttgcccctctcgttaac
aatggacccggatccgtggggaaaggaaacgctgttaatgctgttttaccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccgccgagcgttggcaccggggcgcccacggtaacg
ctggtgaggccccccatccacacagcaggacccacggtggttgcagctggtgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttcccttcagacgtcacttgtgaacagccagtct
ggttccagtgtgccagcagcttctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactgctggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtcctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccctggcacagatgcaggcccaggcacacgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcggccc
ccggttgtgcaacctcagattgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtcctcagagactgcggctaatgtgaaggaatta
gtacagaatctgctggatggaaaaattgaaccagaagactttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccc
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacccgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gttattcaacagtctcaaaaagctggggcattgataaggcctccacaagtaacgttgaca
cagacacccatggtggcattgcggcaaccacacagtcgcattatgctcaccactcctcaa
atccaactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacaaggtcctgtaaagacgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaatcggtaaaaaacacggaataacagaaatccatcctgatgtagttagctatgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggcg
cagctcaagttctttgaacaacttgatcaaatagagaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagagcagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcccagatgagacagagg
gatgccaacctgactgcattagctgccatcggtcccaggaagaaaaggaaagtagattcc
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
DBGET
integrated database retrieval system
