Serinus canaria (common canary): 103819461
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Entry
103819461 CDS
T05755
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103819461 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103819461 (SMARCA2)
03036 Chromosome and associated proteins [BR:
scan03036
]
103819461 (SMARCA2)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103819461 (SMARCA2)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103819461 (SMARCA2)
Chromatin remodeling factors
BAF complex
103819461 (SMARCA2)
PBAF complex
103819461 (SMARCA2)
GBAF(ncBAF) complex
103819461 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103819461
NCBI-ProteinID:
XP_018773960
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTAAGP
GAAPGMPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKIVLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtccacctagtgtcccacatccaatgccaacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacatccatctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagctggagacccacaa
gttatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttgccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacaacagcagcctcccagt
gccttcaacaggcagtctggtattggattacacgcaatgagtggcactgctgctggacca
ggggctgcaccagggatgcctgggcatacaactgccattacccctaaaacatggactgaa
ggccaagccccagatatgagcgtctctaatgcacagcagaagcttccagcaccagctcct
agtgggaggccttctcctgctcctgctgctgcccagcctgctgccaccatgcctgggccc
tctgtaccacagcccccgcctggacaaccttcaccaattgtccagctgcagcagaagcag
aaccgcatcagccctatccagaagccacaaggactggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggaactggagaacttacct
ggttctctgccccctgatctgcggaccaaagctacagtggagttgaaggcacttcggtta
ctgaatttccaacgccagttaagacaagaggtagtagcctgtatgcgtcgtgacacaact
ctggagacagcattgaactccaaagcctacaaacgaagcaagcggcagactttaagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagttgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaagaaggaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaagaccgacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaggcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gccgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccattgat
gagagcagtcagatgagtgaccttcctgtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcaactggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatagtcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaataattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagcgctagagggtctcagtcctactacactgtt
gctcatgctatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacctta
aaacattatcagctccagggactggagtggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacaaactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccttatcgact
ttatccaattggacgtatgaatttgacaaatgggctccttccgtggtgaagatatcttac
aagggtacacccgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaatcctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctctcctcaatttccttcttccaaccattttcaag
agctgcagcacctttgagcagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaagaagaaactattctgatcatccgtcgtctgcataaagtgcttcggcca
ttcttgctgagaagactgaagaaggaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
gggatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcctttgctgaacatctgggctactcaaacggggtcattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagcc
actaaccaccgtgtacttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcacaatactttatctttttgttg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagctttcctccaagctatattggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaggaggaagtccggcttaaa
aagcgaaagagacgaagaaatgtggataaggactctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaatccacccaaactgaca
aaacaaatgaatgccatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagtcttcattcagctcccatccaggaaagaactaccagagtattatgaattg
attaggaaaccagtggacttcaaaaagataaaggaacgaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgttgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctatgaggactccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaggaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagttgaat
aagaaggatgaaaaaagtcgggagaaaggtaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
