Serinus canaria (common canary): 103820583
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Entry
103820583 CDS
T05755
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103820583 (SCAF8)
03041 Spliceosome [BR:
scan03041
]
103820583 (SCAF8)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103820583 (SCAF8)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103820583 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103820583
NCBI-ProteinID:
XP_030091423
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVAQSLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPSSQLPLVPESVNNSL
FHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVE
ANVDDSMDIQQQDMDIDEGQDIAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEW
ETARSSEAAKENTQTTQSATVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFP
VTMSVPPPGYSPIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTSLV
QPPLPIAQETMKDVPFTGLVLPVGTVTSNLATPTLSAGSVFNPLPINKPESDDKGPHLTD
LQISSSENNRSVQSDVSSTSGLVGGVQPPSVSSNSGLTGEGPPSTASSSSGLAGGVQPPS
VSSSSGLVGGVQPPTVSSNSGLAGGMQLPVVSSSSSLAGGIQPTNASSSSGLMAGVPPPN
VSSSSGLLAGVHPPGVSSSPGLLTGMQPPSVSSSSGVLAGVQPPSVSSNSGLLIMPPPNV
STSSGLMGVPPPNISSNSGLLAMQHPAAVPNMPHLNISNQRMPGMPLIDIRPGLMPHSPG
PRFPLMQPGMPPQRAIPPPAILDPSLHPPPPRGPFPPGDIFNQTERPFGTPGRQNIDNIS
NPEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPV
DGREHFARPHIDMRENFGRPGLDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPK
SFHEDRERFRHVNYRFDSRSGPSWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREI
NGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDD
PELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaagcctttaacagcgagttgtactcgctaaatgattataagccaccc
atttctaaagctaaaatgacgcagatcaccaaggcagcaatcaaggctataaagttctac
aagcacgttgtacagagtgttgagaagttcattcaaaagtgcaaaccagagtacaaggtg
cctggtctgtatgtcattgactccattgtgagacagtcccggcatcagtttggacaagaa
aaagatgtatttgcgccaagattcagcaataacatcatcagcactttccagaacttgtac
cgttgccctggtgatgacaagagtaaaattgttagagtgctaaatttatggcagaagaat
aatgtgttcaagagtgaaattattcagcctctcttggatatggcagcaggaattcctcct
cctgttgtgacccctgtcttgcccagtactacagctgctatgagcaacaatacgccaggt
acacctgtgactccagttactccagccaatgtggcccagagtttgcctgatccttgggta
tctcagattgctaacacagacacccttgctgctgttgcacagattttacagagtcctcaa
ggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaacctcagcct
tcgctacttcaagctctggatgccggtctcgttgtccagttacaggccctcacagcacaa
ctcacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctctttt
aataagaagctgatggacaggtttgactttggggaagaatctgaacaaaatgaagagcct
aaaaaggaaactccctcttcccaattgccattagtaccagaatctgtgaacaactcactt
tttcaccaactagctgaacagctacagcagcaaaatttagaacatctcagacagcagctt
ctggagcagcagcagcctcaaaaggcaagtcctgaggagaatcaagaaggaaattttggt
tcagagcactctgcgtcaccatcacaagggagtagtcaacagcagtttttagaagtggaa
gcaaatgtagatgattccatggatattcaacaacaggacatggatatagatgaaggtcag
gatattgctgaagaagagatttttgaacaagaagaaaagaaatcagctgttcgttcaaga
tcaagaactcgttcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacgg
tctggttctcgtaagcggaaacacagaaaacgttcacgctcgagatcaagagaaaggaag
agaaagtcatctcggtcatactccagtgaaagaagggctagggaaagggaaaaagaacgt
cagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactactctt
tgggtaggtcaagtagacaagaaggctacacagcaagatttaacaaacttgtttgaagaa
tttggacagatagaatcaattaatatgattcccccaagaggatgtgcttatgtctgtatg
gtacatagacaggatgcatatcgtgctcttcagaaacttagttctgggtcgtataaaatt
ggatctaaaattattaagattgcttgggctttgaataaaggtgtgaaaacagaatacaag
caattctgggatgtggatctgggagtttcctatattccatgggagaaagtgaaattggat
gatttggagggctttgctgaaggtggcatgattgaccaggaaacagtaaatacagagtgg
gaaacagccagaagctcagaagctgctaaagaaaatactcaaacgacgcagagtgctaca
gttgataagagtaccgttatcacaacacagacagaagcttacacgcaaccagtcactatg
ctgcagattccagtagctccagctgtgcctgctgttagcttggttccacctgcgtttcct
gtcacaatgtctgtccctcctcctggttatagcccaattcctcctccacccttcttgaga
gcaagtttcaacccttcacagccacctccaggttatatgcctcctccagttccacctgtt
gtcccgccacctgttgtcccaccacctgtagtcccaccagttgttccaacatctttagta
cagcctccattaccaattgcacaagagacaatgaaggatgttccttttactggccttgtt
ctaccagttggcacagttaccagcaatctagctactccaacattatctgctggaagtgtt
tttaatcccctgccaatcaacaaaccagaatcagatgacaaaggaccacatcttacagac
cttcagatttcttctagtgaaaacaatagatctgtgcaaagtgatgtctcgagtacctct
ggacttgttggaggagtgcagccacccagtgtctcaagcaattctgggcttactggagaa
gggccaccatccactgcctcaagtagctctgggcttgcagggggagtacagccacccagt
gtttcgagcagctctggacttgtaggaggagtgcaaccaccaactgtttccagcaattct
ggtcttgcaggaggaatgcagctacctgttgtctccagtagctcttctcttgctggcggg
attcagccaactaatgcctcaagtagctctggacttatggctggagtgccaccaccaaat
gtctcaagtagctcagggcttctagctggagttcatccacctggtgtctcaagcagccct
ggccttctgacaggaatgcagccacccagtgtgtccagcagctcaggagttctagcagga
gtacagccaccgagtgtttcaagcaactccgggcttctcataatgccaccacccaatgtt
tcaactagttctggacttatgggagtgccaccaccaaatatttcaagtaattctggactt
ctggcaatgcagcatccagctgcagttcccaacatgcctcatttaaatatcagtaatcaa
agaatgccaggaatgcctcttatagatatccgtccaggcctaatgccccattcgcctgga
ccaaggtttcctttaatgcagccaggcatgccaccacagcgtgctattcctcctcctgca
atccttgatccatctcttcacccaccaccacctcgaggtccttttcctccaggagatatt
tttaatcaaacagaaagaccttttggaacaccgggaagacaaaatatcgataacatttct
aatccagaaaaaaggctaccacttggaggtgataacattcaacaggagggggacagagat
tatcgctttcctccagtggaaaaccgagataatcttaacagaccatctccagtggatgtc
cgagattctgttggacgaccaccagttgatccaagagaaggtataggaaggcctccggta
gatggaagagagcactttgctagaccacatatagacatgagagaaaattttggaagacca
ggtttagataaccttggccgaagagagcattttggtttcaattcagacaagcactgggga
cagagaggagattatgatgaaagagagcaccatgcctttcctatttatggtggccctaaa
agcttccatgaagacagagagcggtttcggcatgtaaactataggtttgatagtagaagt
ggtcccagttggaatagaggatttgaacaagatgctcacagagattttgatgaccgcaga
agaccctgggaaagacagagggatagggatgacagagattttaatttttgcagagaaatt
aatggaaacaggtttggaagagacagaatgtcaaacaactggatcccgcctccacatcca
cgggtttttgaatattttgatggggccacttctcaacgcaaagctgataatatgccccag
gtaaatggtgaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggatgac
ccagaactttatgaaaaactgacatcttctgtcgagataaacaaagagaagagtgacaca
gaagctgatatagagagtgaaccagtggtagaaagcacagaaactgaggggacataa
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