Serinus canaria (common canary): 103823104
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Entry
103823104 CDS
T05755
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
103823104 (LRRTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
103823104
NCBI-ProteinID:
XP_009096389
UniProt:
A0A8C9UDF6
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFQGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDADPTSVNTFSPVTNNSEQTLGYGSATATYDAPDGDEDRTTYAVTITMPGENSENA
VQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPAGLRQLRQCFVTQRRKQKQKQTMHQMAA
MSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttattggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagctgtgaatagtgggtgtcca
cagctctgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaagagctcaccctg
agttccaacaaaataacccaactgcccaacaccaccttccgccccatgccaaacttgcgc
agtgtggatttatcatacaacaacctgcagtctttggagcctgacctgttccacgggctg
agaaaactgacaactttgcacatgcggtcgaacgccatcaagttcgtgccggtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactctttcgctggcttgttcaaactcactgagctgcaccttgagcacaatgac
ttggtgaaagtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccatcgtagtaaacactttggactggatatggcaactcgaaaag
atggatctctccggcaacgaaatcgaatacatcgaacctcacgttttcgaaagtgtacct
catctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctg
gactcctggaagtccctcacaagcatcagcctctctgccaacgcctgggattgcagccgg
aacgtctgcgccctggcctcctggctcagcaacttccagggtcgctacgacagcaacctg
ctctgtgccacccccgagtacgcccagggagaggatgttttggacgccgtgtacgccttc
cacttgtgcgaggacgccgaccccacgagcgtcaacaccttctccccggtgaccaacaac
agcgagcagacgctgggctacggctcggccaccgccacctacgacgcgcccgacggcgac
gaggaccggaccacgtacgccgtcaccatcaccatgcccggcgagaactccgagaacgcc
gtgcagattcacaaggtggtgacgggcaccatggcactgattttttccttcctcatcgtg
gttttggtgttgtatgtctcctggaagtgcttcccagccggcttaaggcaactaagacag
tgctttgtcacacagcgcaggaagcagaagcaaaaacagaccatgcaccaaatggctgcc
atgtcagcccaggagtattatgttgattacaaacccaaccacattgagggagccctggtg
atcattaatgagtatggatcttgctcctgtcaccagcagccagcgagggaatgcgaggtg
tga
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