Serinus canaria (common canary): 103824033
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Entry
103824033 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103824033
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
103824033
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans_N
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103824033
NCBI-ProteinID:
XP_030086206
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MEAAPPRRSPEPREKPPVLGRGGSGGARGGVGRGPGSPAATEQIVSEGEAAAAGTFVXRQ
LGAMLXPAVNKFSLRMFGSHRAVEIERQRVKSAGAWIIHPYSDFRFYWDLIMLLLMXWNL
IILPVGITFFKDENTLLDRFNVLSDTFFLADLVLNFRTGHLVEDNTEIILDPHTIKMKYL
KSWFLVDFISSIPVDYXFLIVDLETQVDSDVYKTARALRIVRFTKILSLLRLLRLSRLIR
YIHQWEELAPACSPDLPMTYDLASAVVRIFNLIGXCCCCALDGCLXFLVPMLQDFPEDCW
VSKNHMVNDSWGKQYSSPCSKAMSHMLCIGSGSRPEGMTDVWLXMLSMIVGATCYAMFIX
HATALIQSLDSSRRQYQEKVSRCEQLQSFHKLPGDTRQRIHEYYEHRYQGKMFDEEXILG
ELSEPLKEEIINLNCRNLVANMPLFANADPHFVTAMLTNLRFEVFQPGDFIXREGTVGQK
RYFIQXGVVSILTKGNKETKRLMALLWGPVPAEICLLTRGRRTASVRXDTYCRLYSLXVD
NFNEVLEEYPMMRRAFETVAMDRLDRIGKKNSILLRKRAEHSSGPLNTEMIQQIVKHDQD
MAHNIQDLQQMAXGRELSGKVIWEPLVHAPLQTAAATTNVAIALTHQHSLXAHIFLPPSS
ISSPSLPKPTLLTNPVRRSQPSLGAPGPXPVSSPSGAQSHLQTPAAGSPSSPMVQSQAPL
RSGGQRHSSGAQPLPRTAQRGEMPAGAKQXPAPAPQPQLSRSRGASVSTSLLQQAAGAAS
PSSEQALXPGRTLHYSLSRATGSHISLLMQPQQLVKHRSIQGLPVGRLTQDVRLLSASQP
SLPXKVAQQADGSSLKQGRKSAGNLARRSSPRXPDLAKPCAGMPXQPAHSQPMPSGSLAQ
PXRSAAGASAPQSPGSASRQAAGPSRKGSVAFSPEVETAKPKLPQHLSRARLTLAAPPAC
PHVTQGLPDAHLDAQTALPSPLPLGLAACAEAQDHRVQQSPAAPPAEGKAPGHGGSAEPR
RCGRAPGRPRFPLARHPSYTGALPRAPASRWRREGD
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccgccgcgacgaagccccgagccgcgggagaagccgccggtgctggga
cggggaggcagcgggggcgcccgcgggggcgtcgggcgcggccccggctcgccggcggcg
acggagcagatcgtgtcggagggcgaggcggcggcggcgggcacgttcgtgncacggcag
ctcggggcgatgctgncacccgccgtgaacaagttctcgctgcgcatgttcggcagccac
cgggccgtggagatcgagcggcaacgggtgaagtcggcgggcgcctggattatccatccc
tacagcgacttcaggttttactgggacctcatcatgctgctcctgatgnggtggaatttg
atcatcctgcccgtgggcatcaccttcttcaaggatgagaacacactcctggatcgtttc
aacgtgctttcggacactttcttcttggctgacctggtgctgaacttccggacagggcat
ctggtggaggacaacacggagatcatcctggacccgcacaccatcaaaatgaaatacttg
aagagctggttcctggtcgacttcatctcctccatccctgttgactacnattttctcatt
gttgacctggagacccaggtggattctgatgtctacaagacggcgcgggccctgcgcatc
gtgcgcttcaccaagatcctcagcctgctgcgcctgctgcgcctctcacgcctcatccgc
tacatccaccagtgggaggagctcgctcctgcatgttctccagatcttcccatgacgtat
gacctggccagcgctgtggtgaggatcttcaacctcatcggatgatgctgctgctgtgca
ctggacggctgcctcnnattcctggtgcccatgctgcaggacttccctgaggactgctgg
gtctccaagaaccacatggtgaacgactcgtggggcaagcagtactcgtcaccctgttca
aaggccatgagccacatgctgtgcatcggctcgggcagcaggcccgagggcatgaccgac
gtgtggctcnacatgctcagcatgatcgtgggggccacctgctatgccatgttcatcngc
cacgccaccgccctcatccagtccctggactcgtcccggcgccagtaccaggagaaggtc
agcaggtgtgaacagctacagtcattccacaagctgcctggggacacgcgccagcgcatc
cacgagtactacgagcaccgctaccagggcaagatgtttgacgaggagnacatcctgggg
gagctcagtgagccactcaaagaggaaatcatcaacttgaactgccgcaacctggtggcc
aacatgcccctgtttgccaacgctgacccccactttgtgacagccatgctgaccaacctg
cgcttcgaggtcttccagcctggggacttcatcnatcgtgagggcaccgtggggcaaaaa
agatacttcatccagnccggcgtggtcagcatcctcaccaagggcaacaaggagacaaag
cgtctgatggccctactttggggccccgtccctgcagagatctgcctcctgacgcggggc
aggcgcacggccagcgtgaggnatgacacctactgccgcctgtattccctgntcgtggac
aacttcaacgaggtgctggaggagtaccccatgatgaggagagcctttgagaccgtggcc
atggaccgcctggaccgtatagggaagaagaactccatcctgctccgcaagcgagccgag
cacagctcggggcccctgaacactgagatgatccagcagatcgtgaagcacgaccaggac
atggcccacaacatccaggacctgcagcagatggcgnatggccgggagctgagcggcaag
gtgatttgggagccgctggtgcacgcacccctgcaaacagccgccgccaccaccaacgtg
gccatcgcgctgacccaccagcacagcctgncggctcacatcttcctgccgccctcctcc
atctccagcccgtctctcccgaagcccaccttgctcaccaatcccgtgcgccgctcccag
cccagcctgggggctcccggccctnnccccgtgagctcgccctccggggctcagtcccac
ctgcagacaccggccgccggttcgccttcctcgcccatggtccagtcccaggcgccgctg
cggagcgggggccagagacacagctcgggggcgcagcccctgccccgaacggcgcagagg
ggggagatgccagcgggggccaagcagnnccccgcgccggccccccagccccaactctcc
cggtcccgcggcgcctcggtctccacctcgctgctgcagcaagcggctggcgctgcatcc
cccagctccgagcaggcgctgncgccggggagaacgctccactacagcctgtcccgagcc
accggctcccacatctcgctcctgatgcagccccagcagctggtgaagcacaggagcatc
caggggctgccggtggggcggctcacccaggatgtccggctcctttccgcctcccagccc
tcccttcccnacaaagtggcccagcaagctgacgggagctctttgaagcagggcaggaaa
tctgcagggaacctggcccgcaggtcctcgcctcggtagccggacctggccaagccgtgc
gcggggatgccgngccagcccgcacactcgcagccgatgccttcgggatcgctggctcag
ccgngccgctccgccgcgggagcgtccgcgccccagtccccgggctccgcgtcccggcag
gcagccggtccctcccgcaagggctccgtggccttcagccccgaggtggaaacggcgaaa
cccaaactcccccaacatctgtctcgagccaggctgacgctggcagctcctccagcctgt
cctcatgtcacacaggggctgcctgatgcccacctcgatgcccagactgctctgcccagc
cctttgcctttagggctggcggcctgcgccgaggcacaggaccaccgggtccagcagagc
cccgctgccccgccggctgagggcaaagccccgggacacggaggctccgcagagccccgg
agatgcggcagagcccccggccgtccccgtttcccgctcgccagacacccgtcctacacc
ggagctctgccccgagcccccgcatcccggtggcggcgggagggggattag
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