KEGG   Serinus canaria (common canary): 108963685
Entry
108963685         CDS       T05755                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X2
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
scan  Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:scan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scan03400]
    108963685 (MDC1)
DNA repair and recombination proteins [BR:scan03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108963685 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 108963685
NCBI-ProteinID: XP_018780755
LinkDB
Position
Unknown
AA seq 1632 aa
MAREGALEDPAVPPDVEGPQKRLPCSQNSPDVIGEEPDPDVGDLKMPKVAQDTSEASNVA
AEAPNPDVLWARNGHRTLLVESDTDVEEEEPNPNVGPQKWLKMTQNVPETPDVGLKTPNP
EVLWLKNEHGTLMVESDTDVEEEGPNPDVGPQKWLKMTQNVPETPDVGLKTPNPEVLWLK
NAHGTLLVESDTDVEEEEADPEVEPPKRLKITQNIPGTPDVAGKTPNPDVSGPKMQHRME
LVDSDTDVDEDPDVQPKKRLKVTQNMPGIPDVEVETPSPVVKTPKIGHWRILMDSDTDVE
EEENPDVQPQNQLRMTQNMSETPDVAAKPLNPDVSGPKRHSQMLLLDSDTDVEDEVNPDV
QAPKRLKVTQNMPRIPNVEVATPNPAVERPKIGHQTLVEDSDTDVEEDPDVQPPKRLRRT
QNLPKTPDVRWGAPNPDVSGPTTRSQMLLVDSDTDVEEDPDVQPLKRLRVTQNVPETPDM
SAKPPNPDVSGSGIRCQAFLVDSDTDVEEEEEVNPDIETLKKLEMTQNVPESPDVVAQTP
SPDVGMTKNGCQALLVDSDTDVEKEVNADVRPSKRWEIPQNVPQTSDVPSQPPNPAVKGS
QRGHGALLVDSDTDVEEEENPDVWSLKRLKPAPNVSETPDVRPKMPNPDVSGTKIGSGML
LVDSETDVEEDEAGPDVQPFKRRKITQNVPETPDVLTPTQNLAVGSSEISCGALVVESDP
DVEEDEADPDVRPSKKKKITQDVPGTPDVGRLQRTQNVTKTPDVEGEEEGWDPDVATQLF
LPPNSDEGEAEVDPDVGSPEQSKMTQKPLEIPDVEEEEVSDPNVATQLFLPSPDVGSPKP
LKMTQNPPKIPDVEEETPDPDEEEEQESDPDVATQLFLPSPDVGNPESSKTALKDTRIPD
VEEKEESDPDVATQLFLSSPGVGSSEGPRTTPKDPKIPDVEGLPSLDPDVATQLFLPSHP
GVEDGLSPDVLGPKQPRMASNDPRIPVVKAEIPDPDVEGEEDLDVATQLFLPPDPDVEGE
GPSQPGAGAPKPPKSPLNPLKIPDVDMESPNPDEEESLRGRRLLLGDAGPDVEEVSPNPD
VEVSKRPQTASKVPEIPDAEVDTVNPDVEGPRGPGLNPDVATQLFLPPDPDVERPESPKK
ALDEPQIPDVEEAAPNPDVEGPPSPAQEEAEAPPTPQVRRSRRLAGSGGGGASHGPTPTQ
NGTNQGSKPCPSPKPHPQRGQDPSVAVLEEAPPSMSIKGNGRGSMEAPPPEEEEPAAGAK
RQLRPRAAPGSAQIRVLFTGLVASPALRVALGTLGGTEATSVHDCSHLVTDGIRRTLKFL
CALGRGVPIVTPQWLLESSHSGRLLSPGPFLPRDPPCERRFGFRLRPALARARERPLLQG
YQVHVTPSVQPCPEDMRDLVTCCGGTFLPQLPREHAPRVLVISCPQDRWLWPPAMAAQLP
LLSAELLLSGVLRQCLELAPFLLSPWQPPENTPEPHQNTPNPTQNQKNPTQNTPNSPNPT
QKTLNPSQKRKNPPPKTPKPSPKSKNPPQKPSNPAQNTPNPPPKPPNPAQTQKNPPKKSQ
NPPKTKESPPKTPKSHPKYPTSNPFPGPLSGVPPLPQAPPEPGVDEDPPKIPPKNPKFRD
PPKNPKSTQKTP
NT seq 4899 nt   +upstreamnt  +downstreamnt
atggcgcgggagggtgccctggaggatccagctgtgcccccagatgttgagggcccccaa
aaacgccttccctgctcccaaaattctccagatgtgatcggggaggagccagatccagat
gttggggacctaaaaatgcccaaagtggcccaagacacctctgaggcttcaaatgtagca
gcagaagccccaaatccagatgtgctatgggccagaaatgggcaccggacactgctggtg
gagagtgacacagatgtggaggaggaggagccaaatccaaatgttgggccccaaaaatgg
cttaaaatgacccaaaatgtgcctgaaactccagatgtggggctaaaaaccccaaatcca
gaagttctatggcttaaaaatgaacatggcacactgatggtggagagtgacacagatgtg
gaggaggaggggccaaatccagatgttgggccccaaaaatggcttaaaatgacccaaaat
gtgcccgaaactccagatgtggggctgaaaaccccaaatccagaagttctatggcttaaa
aatgcacatggcacactgctggtggaaagtgacacagatgtggaggaggaggaggctgat
ccagaagtagagccccccaaacgactgaaaattacccaaaacatcccaggaactccagat
gttgcaggaaagaccccaaatccagatgtttcagggccaaaaatgcaacataggatggag
ctggtggacagtgacacagatgtggacgaggatccagatgtgcagcccaagaaaaggctt
aaagtgacccaaaacatgcctggaattccagatgtagaggtggaaaccccaagtccagtt
gtgaagacgcccaaaatcggacactggagaatcctgatggacagcgacacagatgtggag
gaggaggagaatccagatgtgcagccccaaaaccaactcagaatgacccaaaacatgtcc
gaaaccccagatgtagctgcaaaacccctgaatccagatgtttcgggtccaaaacgccat
tctcagatgctgctgttggacagcgatacggatgtggaagatgaagtgaatccagatgtg
caggcccccaaaaggctcaaagtcacccaaaacatgcccagaattccaaatgtggaggtg
gcgaccccaaatccagctgtggagaggcccaaaatcgggcatcagacgctggtggaggac
agtgacacagatgtggaggaggatccagatgtgcagcccccaaaaaggctcagaaggact
cagaatttacccaaaactccagatgtgcgatggggggcaccaaatccagacgtttcaggt
cccacaaccaggagtcagatgctgctggtggacagtgacacagatgtggaggaggatcca
gatgtgcagcccctgaaacggctcagagtgacccaaaacgtccctgaaactccagatatg
tctgcaaagcccccaaatccagatgtttcaggctctggaatcaggtgccaggcatttctg
gtggacagtgacacagatgtggaggaggaggaggaggtgaatccagatattgagacccta
aaaaagcttgaaatgacccaaaatgtgcctgaaagtccagatgtggtggcacagacccca
agtccagatgttggaatgaccaaaaatgggtgtcaggcactgctggtggacagtgataca
gatgtggagaaggaggtgaatgcagatgttcgtccttcaaaaagatgggaaattcctcaa
aatgtgccccaaacttcagatgtgccctcacagcccccaaatccagctgtgaaggggtca
cagaggggtcatggggcactgctggtggacagtgacacagatgtggaggaggaggaaaat
ccagatgtttggtccctaaaaagactgaaaccagccccaaacgtgtctgaaactccagat
gtgcggccaaaaatgccaaatccagatgtttcaggcacaaaaattgggagtgggatgctg
cttgtggacagtgagacagatgtggaggaggatgaggcaggtccagatgttcagcccttt
aaaagacggaaaattacccaaaatgtgcctgaaactccagatgtgctcacaccaactcaa
aatctagctgttggaagctctgaaatcagttgtggagccttggtggtagagagtgaccct
gatgtggaggaggatgaagctgatccagatgttcggccttcaaaaaaaaagaaaattacc
caagatgtgcctggaactccagatgttgggaggcttcaaaggacccaaaatgtgaccaaa
actccagatgtggagggggaggaggaagggtgggatccagatgtggccacccagctgttc
ctgcccccaaattcagatgagggagaggctgaggtggatccagatgttgggagcccagaa
caaagcaaaatgacccagaagccactggaaattccagatgtggaggaagaagaggtgtca
gatccaaatgtggccactcagctgttcctgccctctccagatgttggcagcccaaaacca
ctcaaaatgacccagaaccctcccaaaattccagatgtggaagaggaaaccccagatcca
gatgaggaggaagaacaggagtcagatccagatgtggccactcaactgttcctgccttct
ccagatgttgggaacccagaaagctccaaaacagccctgaaggacaccagaattccagat
gtggaggagaaagaggaatcagatccagatgtggccacccagctgttcctgtcttctcca
ggtgttggaagctcagaaggccccagaactaccccaaaggaccccaaaattccagatgta
gaggggctgccctccctggatccagatgtggccacacagttgttcctgccctcccatcca
ggtgtggaggatggcctaagtccagatgttctaggtccaaaacaacccagaatggcctca
aatgaccccagaattcccgttgtgaaggctgagatcccagatccagatgtggagggggag
gaggacttggatgtggccacccagctattcctgccccctgatccagatgtggagggggaa
ggaccctcacaaccaggtgctggggccccaaaaccacccaaaagtcccctaaacccgctc
aaaattccagatgtggacatggagagcccaaatccagatgaggaggagtccctgaggggc
cgcaggttgttgctgggggatgctggtccagatgtggaggaggtgagcccaaatccagat
gtggaggtctcaaaaagaccccagacggcctcaaaagtccctgaaattccagatgcagag
gtggacaccgtaaatccagatgtggagggaccaaggggccctggtctgaatccagatgtg
gccacccagctgttcctcccccctgacccagatgtggaacgtccagaaagccccaaaaag
gccctggatgagccccaaattccagatgtggaggaggcggccccaaatccagatgttgag
ggtcccccaagccccgcccaggaggaagcagaagctccgcccacaccacaggtgcggcgc
agtcggcgattggctgggagtggagggggcggagcctctcatggccccacccccactcag
aatgggaccaatcaaggctccaagccatgcccttcacccaagccacacccccagagaggg
caggacccatcagtggcagtgcttgaagaggccccaccctccatgtccataaaaggaaat
gggcgaggctcaatggaagccccacccccagaggaggaggagccagcagcaggtgccaag
cgccagctccgcccccgggcagcaccaggctccgcccagatccgggtgctgttcaccggc
ctggtggcctccccggcactgcgggtggccctggggacgctgggtggcaccgaggccacc
tctgtgcacgactgcagccacctggtgactgatggcatccgccgcacactgaagttcctg
tgtgccctgggcaggggtgtccccattgtcaccccccagtggctgctagagagttcccac
agtggccgcctgctgtccccaggtcccttcctgccccgggacccaccctgtgagcggcgc
ttcggcttccgcctgcgcccggcgctggcccgggcccgggaacggcccctgctgcagggg
taccaggtgcacgtcacccccagtgtccagccatgccctgaagacatgcgggaccttgtc
acttgctgtggtggcaccttcctgccacagctgccccgggaacacgcgccccgtgtcctg
gtgatctcgtgtccccaggaccgctggctctggcccccggccatggctgcgcagctcccg
ctgctctcggccgagctgctgctctcgggggtcctgcggcagtgcctggagctggccccg
ttcctgctgagcccctggcagccccccgaaaacacccctgagccccaccaaaatacccca
aatcccacccaaaaccaaaaaaatcccacccaaaataccccaaatagcccaaatcctacc
caaaaaaccctaaatccctcccagaaacgaaaaaatcctccccccaaaaccccaaaaccc
tccccaaaaagcaaaaatcctccacagaaaccctcaaatcctgcccaaaatactccaaat
ccacccccaaaaccccccaatcccgcccaaacccaaaaaaatccccccaaaaaatcccaa
aacccccccaaaacaaaagaatcccccccaaaaacgcccaaatctcacccaaagtacccc
acctcaaacccattcccgggcccattgtcgggggttccacccctcccccaagccccccca
gaacccggagtggacgaagacccccccaaaatcccccccaaaaaccccaaattcagggat
ccaccaaaaaaccccaaatccacccaaaaaaccccctaa

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