Saccharolobus caldissimus: SACC_05490
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Entry
SACC_05490 CDS
T07710
Name
(GenBank) radical SAM protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
scas
Saccharolobus caldissimus
Brite
KEGG Orthology (KO) [BR:
scas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scas03016
]
SACC_05490
Enzymes [BR:
scas01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
SACC_05490
Transfer RNA biogenesis [BR:
scas03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SACC_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
BDB97532
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Position
480009..481433
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AA seq
474 aa
AA seq
DB search
MQVIRKPTRMLSGVTIVSIMTHPYPCPHGKCIFCPGGTEVGTPQSYYGREPTLMRAIENN
FHPFYQVQSRLKQYVNNGHIPSKVELIIMGGTFLAMPLDYQEWFVTNALEAMNRFPSSEK
PQFVYLEDAQVRNETANIRCVGMTVETKPDWAMEWHADQMLRLGVTKVELGVQTIYNDIL
KFTNRGHTVEDSIKATRILKDSGFKVVYHIMLGLPGSDPDKDLEAFKELFRNPDFRPDML
KIYPTLVVETAPLVHLWKRGLYKPYDTETLIELISEMYRYIPKWVRVMRIQRDIPANVIL
DGNKKGNLRELVEKKAIEKGIKINEIRYREVGMAWQHRGILPEEDKIKLTKEVYEASEGI
EVFLSFEDPKEILIGYLRLRIPSNKAHRREIISERSAIVRELHVYGIEVPIGMWDELGFQ
HKGYGSKLLAEAEKIAREDFDVKKILVLSGIGVKEYYMKRGYTKEGPYMSKILI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaataagaaagccaactagaatgttatctggagtaactatagtgtctataatg
acacacccttatccatgcccacatggaaaatgtatattctgccccggtggtactgaagta
ggaactccccaaagctattatggaagagaaccaacacttatgagggcaatcgaaaataac
tttcatcctttttatcaggttcagtctaggcttaagcaatacgttaataatggacatatt
ccaagtaaggttgagctaataataatgggaggcacttttttagcaatgccactagattat
caagaatggtttgtcacaaatgcactagaagctatgaatagatttcctagctctgaaaaa
ccgcaatttgtctatttagaagatgcacaagtaagaaatgaaactgctaatattcgttgt
gttggaatgactgttgaaactaagccagattgggccatggagtggcatgcagatcaaatg
ttaagacttggggttactaaggttgaattaggggttcagacaatttataatgatattttg
aaatttacaaatagaggacatacagtagaagattcaataaaggctaccaggatattaaaa
gattctggatttaaggttgtctatcacattatgcttggcctaccgggttctgatccagac
aaggatttagaggcttttaaggagctatttagaaatccagatttcagaccagatatgtta
aagatatatcctacattagttgtagagactgcacctttagttcacttatggaagagggga
ctctataaaccttatgataccgaaactttaattgaattaatttctgaaatgtatagatat
attccaaaatgggttagagttatgagaatacagagagatatccccgctaatgttatttta
gacggaaataagaaaggaaacttaagagaacttgtagagaaaaaagcaatagaaaaagga
attaagataaatgagataagatatagagaagtaggaatggcatggcaacataggggaata
ttgccagaggaagataaaataaaattaactaaagaggtatatgaagctagtgaggggata
gaagtatttttatcattcgaagatcctaaggaaatcttaattggttatctaagattaagg
ataccttcaaacaaagctcatagaagagaaataataagtgagagaagtgcaatagttagg
gaacttcatgtttatggaatagaagtacctataggaatgtgggatgagttaggttttcaa
cataaaggttacggaagtaaattgttagctgaggctgaaaaaatagcacgcgaagatttt
gatgtaaagaagattttagtcttatctggaataggggttaaggaatattatatgaaaaga
ggatatacaaaagaaggtccttatatgtctaagatacttatttaa
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