Streptomyces scabiei: SCAB_29781
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Entry
SCAB_29781 CDS
T01187
Name
(GenBank) putative 2-oxoglutarate dehydrogenase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
scb
Streptomyces scabiei
Pathway
scb00020
Citrate cycle (TCA cycle)
scb00630
Glyoxylate and dicarboxylate metabolism
scb00785
Lipoic acid metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb01200
Carbon metabolism
scb01210
2-Oxocarboxylic acid metabolism
Module
scb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SCAB_29781
00630 Glyoxylate and dicarboxylate metabolism
SCAB_29781
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SCAB_29781
Enzymes [BR:
scb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SCAB_29781
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
SCAB_29781
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SCAB_29781
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
SCAB_29781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
CBG70083
UniProt:
C9ZA89
LinkDB
All DBs
Position
3391069..3394830
Genome browser
AA seq
1253 aa
AA seq
DB search
MSPQSPSNSSISTDADQAGKNPAAAFGPNEWLVDEIYQQYLQDPNSVDRAWWDFFADYKP
GAPAASAPVSTAAAAPAAPAQAAPAAPAAPAPAAPKPAAVPAPAVAKPAAAAPAPAKPAA
AAPAKQAAPAEGPELITLRGPAAAVAKNMNASLELPTATSVRAVSVKLLFDNRIVINNHL
KRARGGKISFTHLIGYAMVQAIKTMPSMNWHYAEKDGKPTLVKPPHVNFGLAIDLVKPNG
DRQLVVAGIKKAETLNFFEFWQAYEDIVRRARDGKLTMDDFTGVTVSLTNPGGLGTVHSV
PRLMPGQSVIMGVGSMDYPAEFQGTSQDTLNKLGISKVMTLTSTYDHRVIQGAASGEFLR
IVANYLLGEGGFYDDIFEALRIPYEPVRWLKDIDASHDDDVTKAARVFELIHSYRVRGHV
MADTDPLEYRQRKHPDLDITEHGLTLWDLEREFAVGGFSGKSLMKLRDILGVLRDSYCRT
TGVEFMHIQDPKQRRWIQDRIERPHSKPEREEQLRILRRLNAAEAFETFLQTKYVGQKRF
SLEGGESVIPLLDAVIDSAAESRLDEVVIGMAHRGRLNVLANIVGKSYAQIFREFEGNLD
PKSMHGSGDVKYHLGAEGTFTGLDGEQIKVSLVANPSHLEAVDPVLEGVARAKQDIINKG
GTDFTVLPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQVGFTAAPESSRS
SMYATDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD
NPAFTQPLMYDLIDKKRSVRKLYTESLIGRGDITLEEAEQALQDFQGQLEKVFTEVREAI
AQPAASAAADAPQDGFPVSVNTAITAETVKRIAESQVNVPDHITAHPRLLPQLQRRAGMV
EDGTIDWGMGETLAIGSLLLEGTPVRLAGQDSQRGTFGQRHAVIIDRETGEEFTPLMYLS
EDQARLNVYNSLLSEYAAMGFEYGYSLARPESLVLWEAQFGDFVNGAQTVVDEFISSAEQ
KWSQTSGVTLLLPHGYEGQGPDHSSARPERFLQMCAQNNMTVAMPTSPSNYFHLLRWQVH
NPHHKPLVVFTPKSMLRLKAAASKAEEFTSGEFRPVIGDSSVDPNAVKKVVFCAGKVYYD
LEAERQKRGITDTAIIRIERLYPLPGAEVQAEVNKYPNAEKYLWTQEEPANQGAWPFIAL
NLIDHLDLAVGADVPHGERLRRISRPHGSSPAVGSAKRHQAEQEQLVREVFDA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccacagtcccccagtaactcgagcatctcgaccgacgcagaccaagcgggtaag
aaccccgctgcggccttcggtccgaacgagtggctcgtcgacgagatctatcagcagtac
ctccaggacccgaactcggtggaccgagcctggtgggacttcttcgccgactacaagccg
ggcgcacctgccgcctcggctccggtgagcaccgcggccgcggcacccgccgcgccggcc
caggccgctcccgcggctccggccgcgcccgcaccggcggccccgaagcccgccgccgtt
ccggcacccgccgtcgcgaagcccgcggccgccgcgcccgcaccggccaagccggccgcc
gcggcccccgcgaagcaggccgcgcccgccgagggcccggagctgatcacgctgcgcggc
cccgccgccgcggtcgcgaagaacatgaacgcctccctggagctgcccacggccacgtcc
gtgcgcgcggtctcggtgaagctgctgttcgacaaccgcatcgtcatcaacaaccacctc
aagcgcgcccggggcgggaagatctccttcacgcacctgatcggctacgcgatggtgcag
gccatcaagacgatgccgtcgatgaactggcactacgcggagaaggacgggaagcccacc
ctcgtcaagccgccgcacgtcaacttcggcctcgccatcgacctggtgaagcccaacggc
gaccgccagctggtcgtcgcgggcatcaagaaggccgagacgctgaacttcttcgagttc
tggcaggcctacgaggacatcgtccgccgcgcccgtgacggcaagctgacgatggacgac
ttcaccggtgtcacggtctccctgaccaaccccggcggcctcggcaccgtccactcggtc
ccgcgtctgatgcccggtcagtcggtcatcatgggcgtcggatccatggactacccggcc
gagttccagggcacctcgcaggacaccctgaacaagctgggcatctcgaaggtcatgacc
ctgacctcgacgtacgaccaccgggtcatccagggcgccgcctccggcgagttcctgcgc
atcgtcgccaactacctgctcggcgagggcgggttctacgacgacatcttcgaggccctg
cgcatcccctacgagccggtccgctggctcaaggacatcgacgccagccacgacgacgac
gtcaccaaggccgcccgggtcttcgagctgatccactcctaccgggtccgcggccacgtc
atggccgacaccgacccgctggagtaccgccagcgcaagcaccccgacctggacatcacc
gagcacgggctcaccctgtgggacctggagcgcgagttcgcggtcggcggcttctcgggc
aagtccctgatgaagctgcgcgacatcctcggcgtgctgcgcgactcgtactgccgcacc
accggcgtcgagttcatgcacatccaggacccgaagcagcgccgctggatccaggaccgc
atcgagcgcccgcactccaagccggagcgcgaggagcagctgcgcatcctgcgccggctg
aacgcggcggaggccttcgagaccttcctgcagacgaagtacgtcggccagaagcgcttc
agcctggagggcggcgagtccgtcatcccgctgctggacgcggtcatcgactcggcggcg
gagtcccgtctcgacgaggtcgtcatcggcatggcccaccgcggccggctgaacgtcctg
gcgaacatcgtcggcaagtcgtacgcgcagatcttccgcgagttcgagggcaacctcgac
ccgaagtcgatgcacggctccggcgacgtgaagtaccacctgggcgccgagggcaccttc
acgggcctcgacggcgagcagatcaaggtcagcctggtcgcgaacccctcgcacctggag
gccgtggacccggtcctggagggcgtcgcgcgcgccaagcaggacatcatcaacaagggc
ggcacggacttcaccgtcctgccggtggccctgcacggcgacgcggccttcgcgggccag
ggcgtggtggccgagaccctgaacatgtcgcagctgcggggttaccgcaccggcggcacg
gtccacatcgtcatcaacaaccaggtcggcttcaccgcggctcccgagtcgtcgcgttcc
tcgatgtacgccaccgacgtggcccgcatgatcgaggccccgatcttccacgtgaacggc
gacgacccggaggccgtggtccgcgtcgcgcggctggccttcgagttccgtcaggcgttc
aacaaggacgtggtgatcgacctcatctgctaccgccgccgcggtcacaacgagtcggac
aacccggccttcacccagccgctgatgtacgacctgatcgacaagaagcgctcggtgcgc
aagctctacaccgagtccctcatcggtcgcggcgacatcaccctggaagaggccgagcag
gcgctgcaggacttccagggccagctggagaaggtcttcacggaggtccgcgaggccatc
gcgcagccggcggcgtccgccgccgccgacgccccgcaggacggcttcccggtctcggtg
aacaccgcgatcaccgcggagaccgtcaagcgcatcgccgagtcccaggtcaacgtcccg
gaccacatcaccgcccacccgcgtctgctgccgcagctgcagcgccgtgcgggcatggtc
gaggacggcacgatcgactggggcatgggcgagaccctcgccatcggctccctgctgctg
gagggcaccccggtccgcctcgccggtcaggactcgcagcgcggcaccttcggccagcgt
cacgcggtgatcatcgaccgtgagacgggcgaggagttcacgccgctgatgtacctctcc
gaggaccaggcgcggctgaacgtctacaactccctgctctccgagtacgcggcgatgggc
ttcgagtacggctactcgctggcccgtcccgagtccctggtgctgtgggaggcccagttc
ggcgacttcgtcaacggcgcccagacggtcgtggacgagttcatctcgtcggcggagcag
aagtggagccagacctccggcgtcaccctgctcctcccgcacggctacgagggccagggc
ccggaccactcgtccgcccgcccggagcggttcctccagatgtgcgcgcagaacaacatg
acggtcgccatgccgacctccccgtcgaactacttccacctcctgcggtggcaggtgcac
aacccgcaccacaagccgctggtcgtcttcaccccgaagtcgatgctgcgcctcaaggcc
gccgcgtcgaaggcggaggagttcacgagcggcgagttccgcccggtcatcggcgacagc
tcggtcgacccgaacgcggtcaagaaggtcgtcttctgcgccggcaaggtctactacgac
ctggaggccgagcgtcagaagcgcggcatcacggacacggcgatcatccgcatcgagcgc
ctctacccgctgccgggtgccgaggtccaggcggaggtcaacaagtacccgaacgccgag
aagtacctctggacccaggaggagcccgcgaaccagggcgcctggccgttcatcgccctc
aacctgatcgaccacctcgacctcgcggtcggcgcggacgtcccccacggcgagcggctg
cggcgcatctcgcgcccgcacggctcgtcgccggcggtgggttcggcgaagcggcaccag
gccgagcaggagcagctggtgcgtgaggtgttcgacgcgtaa
DBGET
integrated database retrieval system
