Streptomyces scabiei: SCAB_39881
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Entry
SCAB_39881 CDS
T01187
Name
(GenBank) putative glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
scb
Streptomyces scabiei
Pathway
scb00250
Alanine, aspartate and glutamate metabolism
scb00410
beta-Alanine metabolism
scb00430
Taurine and hypotaurine metabolism
scb00650
Butanoate metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb02024
Quorum sensing
Module
scb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SCAB_39881
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SCAB_39881
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SCAB_39881
00430 Taurine and hypotaurine metabolism
SCAB_39881
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_39881
Enzymes [BR:
scb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
SCAB_39881
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
CBG71067
UniProt:
C9Z0V4
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All DBs
Position
4480854..4482293
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AA seq
479 aa
AA seq
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MPLHRWDSDDARDGGNGRKDGHRLAVNPFYGQANPAGGMTEAPPKHRLPDAPLPPSTAYQ
LVHDELMLDGNSRLNLATFVTTWMEPEAGVLMGECRDKNMIDKDEYPRTAELERRCVSML
ADLWNAPDPAAAVGCSTTGSSEACMLAGMALKRRWAKRNADRYPSADARPNLVMGVNVQV
CWEKFCNFWEVEARQVPMEGDRFHLDPAAAAALCDENTIGVVGVLGSTFDGSYEPIAELC
AVLDDLQERTGLNVPVHVDGASGAMVAPFLDEELVWDFRLPRVASINTSGHKYGLVYPGV
GWALWRSAEELPEELVFRVNYLGGDMPTFALNFSRPGAQVVAQYYTFLRLGREGFRAVQQ
STRDVATLLAQQVGGFGDFRLLTRGDELPVFAFTTNEDVTAYDVFDVARRMRERGWLVPA
YTFPENREDLSVLRVVCRNGFTSDLAGLFMEDLGSLLPELRRQRGPLTRDAGAATGFHH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccactgcaccgatgggacagcgacgacgcgcgggacggcgggaacggccggaaggac
ggacaccggctcgccgtgaaccccttctacggccaggccaacccggcgggcgggatgacc
gaggccccgcccaagcaccggctccccgacgccccgctgcccccctcgacggcgtaccag
ctcgtccacgacgaactcatgctggacggcaactcgcggctcaacctcgccaccttcgtc
accacctggatggagcccgaggccggggtcctgatgggtgagtgccgggacaagaacatg
atcgacaaggacgagtacccgcggacggccgagctggagcggcgctgtgtgtcgatgctc
gccgatctgtggaacgcgccggacccggccgccgccgtcggctgctcgaccaccgggtcc
agtgaggcctgcatgctcgccgggatggccctcaagcggcggtgggcgaagcggaacgcc
gaccggtatccctcggcggacgcccggcccaacctcgtgatgggcgtcaacgtccaggtc
tgctgggagaagttctgcaacttctgggaggtcgaggcccggcaggtgcccatggagggc
gaccggttccatctcgacccggcggcggccgcggcgctgtgcgacgagaacacgatcggg
gtcgtgggtgtcctcggctcgaccttcgacgggtcgtacgagccgatcgcagagctgtgc
gcggtccttgacgatctgcaggaacgtacggggctgaacgtgcccgtccacgtcgacggc
gcgtccggcgcgatggtggcgcccttcctcgacgaggagctggtctgggacttccggctc
ccccgggtcgcgtcgatcaacacctcggggcacaagtacgggctggtgtaccccggggtc
ggctgggcgctgtggcggtccgccgaggagctgccggaggagctggtgttccgggtgaac
tacctgggcggggacatgcccacgttcgcgctgaacttctcgcggcccggggcgcaggtc
gtcgcgcagtactacacgttcctgcggctggggcgtgaggggttccgcgcggtgcagcag
tcgacgcgggacgtggcgacgctgctcgcgcagcaggtcggcgggttcggggacttccgg
ctcctcacacggggcgacgagttgccggtgttcgcgttcaccacgaacgaggacgtcacc
gcgtacgacgtcttcgacgtggcccggcggatgcgggagagggggtggctggtgccggcc
tacacgttcccggagaaccgggaggatctgtccgtgctgcgggtggtgtgccgcaacggg
ttcacgtcggatctcgcggggttgttcatggaggacctcggcagcctgttgcccgaactg
cggcggcagcgggggccgttgacgcgggatgcgggggcggcgacggggttccaccactag
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