Streptomyces scabiei: SCAB_45991
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Entry
SCAB_45991 CDS
T01187
Name
(GenBank) putative RNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
scb
Streptomyces scabiei
Pathway
scb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCAB_45991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scb03019
]
SCAB_45991
Enzymes [BR:
scb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SCAB_45991
Messenger RNA biogenesis [BR:
scb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCAB_45991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
CBG71658
UniProt:
C9ZAM4
LinkDB
All DBs
Position
5159095..5160543
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AA seq
482 aa
AA seq
DB search
MPNANEDISALSQVQRRAVSELLRVSPVADDLARRFQQAGFSLALVGGSVRDALLGRLGN
DLDFTTDARPEDVLKIVRPWADALWEVGIAFGTVGAQKDGYQIEVTTYRSEAYDRTSRKP
EVSYGDSIEEDLVRRDFTVNAMAVALPEKEFIDPHGGLEDLSARVLRTPGTPEDSFSDDP
LRMMRAARFAAQLGFEVAPEVVSAMTAMAGRLEIVSTERVRDELNKLILSAHPREGLSLL
VETGLAEHVLPELPALRLERDEHHRHKDVYDHTLIVLEQAIALEDAGPDLTLRLAALLHD
IGKPRTRRFEQDGRVSFHHHEVVGAKMTKKRMTALKYSNELVRDVSRLVELHLRFHGYGM
GEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKANALSRAYDGLEDRIAQLQEQEE
LDAIRPDLDGNQIMEILGVGPGPAIGQAYKFLLELRLENGPMPQDEAVTALKEWWARTPG
VS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacatcagtgccctgagccaggtgcagcgccgcgcggtgagt
gaactgctgcgggtgtcccccgtcgccgacgaccttgcacgccgtttccagcaggcggga
ttctcgctcgccctggtcgggggctcggtcagggacgcgctgctcggccgcctcggcaac
gacctcgacttcaccacggacgcccgcccggaggacgtgctgaagatcgtgcgtccctgg
gcggacgccctctgggaggtcgggatcgccttcggcacggtgggggcgcagaaggacggt
taccagatcgaggtcaccacctaccgttccgaggcgtacgaccggacctcgcgcaagccc
gaggtgtcctacggcgactcgatcgaggaagacctcgtgcgccgggacttcaccgtgaac
gcgatggcggtggcgcttcccgagaaggagttcatcgaccctcatggcgggctcgaggac
ctctcggcacgcgtgctgcgcactccgggcacccccgaggactccttctccgacgacccg
ctgcgcatgatgcgggccgcgcgtttcgccgcccagctgggcttcgaggtggcccccgag
gtcgtctcggccatgacggccatggccgggcgtcttgagatcgtctcgacggaacgggta
cgggacgaactgaacaaactgatcctctccgctcacccccgcgagggcctgagcctgctg
gtcgagacgggcctcgccgagcatgtgctgcccgagctgccggcgctgcgactggaacgg
gacgagcaccatcggcacaaggacgtctacgaccacacgctgatcgtcctggagcaggcg
atcgcgctcgaggacgccggaccggacctcactctgcggctcgccgccctgctgcacgac
atcggcaagccccgtacccgccggttcgagcaggacggccgggtctccttccaccaccac
gaggtggtcggcgccaagatgaccaagaagcgcatgaccgccctcaagtactccaacgaa
ctcgtcagggacgtctcgcgtctggtcgaactccacctgcgcttccacggctacggcatg
ggtgaatggacggactccgccgtccgccgctatgtacgggacgccggcccgctgctggac
cggctccacaagctgacccgttccgactgcacgacacggaacaagcgcaaggcgaacgct
ctgtcccgcgcgtacgacggtctggaggaccggatcgcccagctccaggagcaggaggag
ctggacgccatccgcccggacctcgacggcaaccagatcatggagatcctgggtgtcggg
cccggtccggcgatcgggcaggcctacaagttccttctggagctgcgcctggagaacggg
ccgatgccgcaggacgaggccgtgacggcgctcaaggaatggtgggctcggacgccgggg
gtttcctga
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