Parasphaerochaeta coccoides: Spico_0882
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Entry
Spico_0882 CDS
T01469
Name
(GenBank) amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0882
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_0882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0882
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spico_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_23
AAA_22
AAA_30
nSTAND3
AAA_29
NB-ARC
MMR_HSR1
DO-GTPase2
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
AEC02106
UniProt:
F4GHZ3
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All DBs
Position
1020344..1021114
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AA seq
256 aa
AA seq
DB search
MTVLHTQNMSICFGGLTAVMNLNLALEDKEIVGLIGPNGAGKTTAFNMITGVYAPTSGAV
FLGDRNISGLRPDVISNLGIARTFQNIRLFRDMSVLENILVAGHQRLKSSLFASVVRLPS
YHREERHMFEKARTLLEAVGLSDLEDEKATSLPYGKQRRLEIARALATEPSILLLDEPAA
GMNPQESRELTDFIGQLREKFGLTILLIEHHMQVVMRVCERIYVLDYGQTIAEGKPEEIQ
RNERVIEAYLGGQDNA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgactgtactccacacacagaatatgagcatctgtttcggcggattgaccgcagtcatg
aacctcaatctggctttggaagacaaggaaatcgttggccttatcggtccaaatggagcc
ggaaaaaccacggcgttcaacatgattaccggagtatacgctccgacatcgggagctgtt
ttcctcggcgacagaaacatctctggtttgcggcctgatgttatttccaaccttggtata
gcccgaaccttccagaacatcaggttgttccgggatatgtccgtgcttgagaatatcctg
gtcgcaggacatcaacggctgaagtcttctttgttcgcttcggtcgtcaggttaccgtca
taccatagggaagaacggcatatgttcgagaaagcacgaacccttctggaagcagtcggt
ctgtcagacctggaagatgaaaaagcgacgagcctcccctacggaaaacaacgccgcctg
gaaatagcacgggcacttgccacggaaccgtccattctcctgcttgatgaaccagcagct
ggaatgaatcctcaagagtcacgggaacttactgatttcattggacaactcagagaaaaa
ttcggcctgactatcctcttgattgaacatcacatgcaggttgtgatgagagtctgcgaa
agaatctatgtcttggattatgggcaaacgatagcagagggaaagcctgaagaaatccag
cgaaacgaacgagtgatcgaggcttatctgggaggacaggacaatgcttag
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