Parasphaerochaeta coccoides: Spico_0911
Help
Entry
Spico_0911 CDS
T01469
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00470
D-Amino acid metabolism
scc00550
Peptidoglycan biosynthesis
scc01100
Metabolic pathways
scc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spico_0911
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spico_0911
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spico_0911
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scc01011
]
Spico_0911
Enzymes [BR:
scc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Spico_0911
Peptidoglycan biosynthesis and degradation proteins [BR:
scc01011
]
Precursor biosynthesis
Amino acid ligase
Spico_0911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AEC02135
UniProt:
F4GIK1
LinkDB
All DBs
Position
1056255..1057421
Genome browser
AA seq
388 aa
AA seq
DB search
MKNVAVLSGGRSPEHDVSRMSAENICKELVAAGYGVLPIVITRNGRWFLQDVHESVAVIR
QEAERGVSIHPGDGLWMNGEKLAVDIVFPVTHGTEGEDGRLQALLELAHLPYAGSGTVAS
MMGMYKNLAKDVARILGIPVTPSILLSPDDIAWLGNDEDAPFPRLFTSFDISPDSTGTAR
ADLFLGVLQEKLGKSLLVKPEASGSSVGVTALPQPGAEIFLDAVFMAYIPGERVLVETFI
PDVMELECALLEAEDEIVTAGPGLVRKPAGEESILSYDIKYSVHRHATMEYPPPIAREEA
EMIATYARSLFSALGCTGYARVDFFIDPSGKPDARIFFNEINTLPGLTDTSHWPFLMKCK
GLEWPQMLLEILSRGFEAYSLRHHESDR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtagcagtactttccggaggccgttctccggaacatgatgtctcacggatg
tcagcggaaaatatctgcaaggaacttgtcgcggcgggatatggagtcctgccgattgtc
attacccgaaatggccgctggttcctccaggatgttcatgagtccgtagcggtcatacgg
caagaagcggaacgtggcgtttccatccatccgggcgacggcttgtggatgaatggagaa
aaactcgccgtggacatagtattcccggtgacccatggtacggaaggagaggacggtagg
ctccaggcattgcttgaactggctcaccttccctatgcaggttcgggaacggtcgccagc
atgatgggcatgtacaagaatctggcaaaggatgtcgcccggatcctgggcatccctgtg
actccttccatcctcctgtctcccgacgacattgcatggctgggcaatgatgaagacgca
cccttccctcgccttttcacaagctttgacatttctcccgatagtactggcacagcacgg
gcggacttgttcctcggcgtcctgcaagaaaagctgggtaagagtcttcttgtcaagcct
gaagcaagcggttcctcggtaggcgtgaccgctctgccccagcctggcgcggaaatcttc
ctggatgccgtctttatggcgtatatccctggtgaacgggtactggtggaaactttcatc
cctgatgtgatggagctggaatgtgcgctccttgaggcagaggatgagattgtcacggcg
ggtcccggcttggtgcgtaagcctgccggtgaagaaagtatactgtcctatgacataaaa
tacagtgtccacaggcatgccaccatggaatatcctccacccattgcgcgggaggaagcg
gaaatgattgctacatacgcacgttccttgttttctgccttgggctgtacgggttatgca
cgggtcgattttttcattgacccgtcaggaaagccggatgcacggatttttttcaatgaa
atcaatacccttcccggactcaccgatacgagccattggccttttttgatgaaatgcaaa
ggattggaatggccgcagatgcttttagaaatactcagccgtggctttgaagcctactcc
ttgcgtcatcatgagtcagacagatga
DBGET
integrated database retrieval system
