Gracilinema caldarium: Spica_0045
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Entry
Spica_0045 CDS
T01573
Name
(GenBank) Beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
scd
Gracilinema caldarium
Pathway
scd00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Spica_0045
Enzymes [BR:
scd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Spica_0045
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_35
Cellulase
Glyco_hydro_42C
Motif
Other DBs
NCBI-ProteinID:
AEJ18217
UniProt:
F8EWQ4
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All DBs
Position
complement(46203..48230)
Genome browser
AA seq
675 aa
AA seq
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MSHNLLWGVDWYPEQWDKTLWESDVQRMAEQGFQVVRMMEFAWPILEPRPGNYDFSLFDS
VIDILEKYKLTVVLGTPTAIMPVWLVDQDPTILAVHPNRLTRDFGCRRMGCMNAPVYQKA
ARQLVQAIADHYGPRQSIIGWQIDNEIGHEGSDHCVCDHCRAAWHRWLEKRYETIEELNR
RWGTIFWGSTYTRFDQIPLPRQQVATNHNPALLLDYDRFSSDTAVSWAEAQVQIIRQKAR
AHQFITTNLYPAPLAQCIDMEDMVRIMDAAGWDNYPVWGNQDEPLPYFFTSYVLSYVRGL
HPSGNFKVMEEFSGIQGHTQLGHLPPPEQVALWTNQAIARGANAIFYFRWRTAPYAQEQL
CYGIRDTDNTETERERHIITNMQNLSPVLKTFASEPVPAEACLVYDRDTSRLIREQPLSL
GMDRRPTSYMQVGYDAELARWFAPYVLYNVNCDIKSTKSVNLDNYKLISLPFYQITDEAF
VQKLSDWVARGGHLVLGWRSGSRTTDNWNIDRPLPGLFRELAGIRVTNFEALGTGSTGIC
LKDTLIHQFISKIITCKGEVWADILEPETATIIARYRDSKKHYTGKPAFTRNKYGQGFVW
YLGTSPDPKTTFFLYKSILKQAGLAGRFLGLGIEAVQRITQEGKTVMVLLNHTSKKKRVL
GKIIPPWGTLVIDSI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaatttgttatggggggttgattggtatccagaacaatgggataaaaccctt
tgggagtccgatgttcagcggatggcagaacagggctttcaggtagtacgtatgatggaa
tttgcctggcctattcttgaacctcgcccagggaattatgacttttcacttttcgattcg
gtaatcgatattctcgagaaatataaacttactgttgtgctcggtacgcctaccgccatc
atgcctgtctggcttgtggaccaggatccaaccatacttgcggtacatccgaaccgcttg
acccgagattttggctgtcgccgtatggggtgtatgaatgctcctgtctaccagaaggcg
gcccggcaacttgtccaagcaattgctgatcactatggtcccagacagagtattattggc
tggcagattgataacgaaattggtcatgagggctcggatcattgcgtatgcgaccattgc
cgggccgcctggcatcgctggctcgaaaagcgctacgaaaccatcgaggagcttaaccgc
cgctggggaaccatcttctgggggagcacctacacccgctttgaccagattcccctaccc
cgtcaacaggtagccacaaaccacaatccagcgttgctactagactacgaccggttctca
tcggatacagcagtttcctgggcagaagcccaggttcaaattatccggcaaaaggctcga
gcccatcaatttataactaccaatctctatccagcacctcttgcccaatgcatcgatatg
gaagacatggtccgtatcatggatgctgctggctgggacaattatccagtttggggcaac
caggatgaaccgctcccttacttttttacttcctatgtactctcctatgtgaggggcctt
cacccatcggggaattttaaggtcatggaagaattttccggtatccaagggcacacccag
ctggggcacctgccacccccagaacaggttgcactctggacaaatcaagccatcgcccga
ggagccaatgccattttctatttccgctggcgtaccgctccctatgctcaagaacagctc
tgttatggcatccgagacacggataataccgaaaccgaacgggagcggcacatcattaca
aatatgcaaaacctcagtccggttttaaaaacctttgcatcagagcctgtacctgcagag
gcttgccttgtttacgacagggacacatcccgcctcatccgcgaacaacccctttctctt
ggtatggatcggcgccccacttcttacatgcaagtaggttatgatgcagaactagcccgc
tggtttgctccctatgtgctttataatgttaattgtgacataaaaagcaccaagtcggtt
aatctggataactataaacttatatccctaccgttctatcaaattaccgatgaagccttt
gttcaaaaactttcagactgggtcgccagaggtgggcacctagttctcggctggagatct
ggaagccgtaccaccgacaactggaatatagaccggcctctacccggccttttccgtgaa
ttagccggaatacgggtcactaattttgaagccctcggtacaggatcgaccggaatctgc
ctcaaagatacgctcattcatcaatttatatcaaaaattatcacttgcaaaggcgaagta
tgggccgatatacttgaaccagagacagcgacaattatagcccgctatcgggattcaaag
aaacactatacaggaaaaccggcttttacccgaaacaaatacgggcaaggctttgtgtgg
tatctgggcacttctccggatcccaagacaaccttttttctgtataaatcgattctgaaa
caggcagggttagcgggtcgttttcttggcttaggtatagaggcagttcaacgaataact
caggaagggaaaacagtgatggtgctcttaaaccatacgtctaagaaaaagcgtgttctt
ggcaagattatcccaccctggggcaccttagtaattgatagcatataa
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