Gracilinema caldarium: Spica_0294
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Entry
Spica_0294 CDS
T01573
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
scd
Gracilinema caldarium
Pathway
scd00061
Fatty acid biosynthesis
scd01100
Metabolic pathways
scd01212
Fatty acid metabolism
scd02024
Quorum sensing
Module
scd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spica_0294
00071 Fatty acid degradation
Spica_0294
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_0294
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scd01004
]
Spica_0294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scd04147
]
Spica_0294
Enzymes [BR:
scd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Spica_0294
Lipid biosynthesis proteins [BR:
scd01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Spica_0294
Exosome [BR:
scd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Spica_0294
Exosomal proteins of breast cancer cells
Spica_0294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AEJ18460
UniProt:
F8EZU7
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All DBs
Position
328072..329985
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AA seq
637 aa
AA seq
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MELEQTLPLLIKARAESMPQINIQYAKDESGQFIPKTYETFFKEVQIIAAGLLELGEQRG
SHIGLISDNRQEWLVTDIAVLSIGAADVPRGCDSTDKEIAYILGFSECTLSFAENPKQVE
KILSQKAQMPLLKTLVVYDKIDEALKNKASSCGVQLLHFFELHELGKKRLGKNPDEILRE
IDKGQRDDLATIIFTSGTTGEPKGVMLSHGNFLHQLPSLPLIADLKPGDVWLSVLPVWHS
FERIMQYVAPCYYNGIAYSKPVGSIMLADFKAVRPQWMASVPRIWESVRDGIYRNIRQHG
GIKKILFTFFVSVGTAHAYMRNMTLGLLPNFHRRMRALDTVLGCIPWMLLTPLKALGNVL
VFNKLKALLGGRFKAGISGGGALPSQVDKFFSAVGITLLEGYGLTETAPVIACRRMNNAR
PGCVGQIILNTEVKIVDEKGNSLPPGHQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGWFN
TGDLGMLTYDNEIKITGRAKDTIVLRGGENVEPAPIEAKINESEWISQCMVVGQDQKYLA
ALIVPKQDALMAFAQENNIPIVDYETLLQQPEINELIANDVADLVGPHTGFKPFERVFKF
KLLSKPFEVGRELSHKQEIMRHRVIELYKKEISELFE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgaacaaaccttaccgctcttgattaaagcaagagcagagtcaatgcctcag
attaacatccaatatgcaaaggatgaatcagggcaatttataccaaaaacctatgaaacc
ttttttaaggaagttcagattattgctgctggcctcttagaacttggagaacaacggggt
tctcatattgggcttatttccgataaccgtcaggaatggttggtgaccgatatcgctgtt
ctttctattggtgccgctgatgttccccgggggtgtgattctacagataaagagatcgct
tatattcttggcttttctgaatgtactctttcattcgctgaaaatcccaaacaggtagaa
aagatcctttcccagaaggcccagatgcctcttttaaaaacgctggttgtatatgacaag
attgatgaggctcttaaaaataaagcttcttcctgtggagttcaactgcttcattttttt
gaacttcatgaacttggtaaaaagcggctgggaaaaaatcctgatgaaatcttgcgtgaa
atagataaggggcagcgggatgatctggctaccatcatttttacctccggcacaacaggc
gaacccaagggtgttatgctgagtcatggaaactttctacatcaattaccgagcttaccg
ctcatcgctgacctgaagcctggcgatgtatggctttccgttctgcccgtttggcatagc
tttgaacggatcatgcagtatgttgcaccctgttattataacggtattgcctattcaaaa
cctgttggttctatcatgctggcagattttaaggcggtacgcccccaatggatggctagt
gtgccacgaatctgggaatcggtccgggatgggatttaccgtaatatccgtcaacatggg
gggatcaagaaaatcctttttaccttcttcgtttctgtcggtaccgcccatgcgtatatg
cgaaacatgacactgggtttattacccaattttcatagacggatgagagcccttgatacg
gttttaggatgtataccctggatgcttttaacgcctttaaaggctttaggcaatgtactg
gtatttaacaagctcaaagctctcttaggtggccgctttaaggctggcatttctggcggc
ggggctctgccgtcacaggtagacaagttctttagtgctgtgggcattactcttttggaa
ggttatggtcttaccgaaacagctccggttattgcctgtcgtagaatgaataatgcaagg
cccggttgtgtcggtcagattattctcaacacagaagtaaaaatagtagatgaaaagggt
aatagccttcctccgggacatcaggggcttattatggtccggggcgggcaggttatgaag
gggtactataaaaagccagacttgacggcgaaggtgcttgctcctgacggctggttcaac
actggggatctgggcatgcttacctatgataatgaaataaaaataacgggacgtgccaag
gataccatcgtattacggggtggtgaaaatgtagaacccgcaccaattgaagcgaaaata
aatgaaagtgagtggatatcccagtgtatggtagttggtcaggatcaaaaatatcttgca
gcgctgatcgtgccgaaacaggatgccctcatggcttttgcccaggaaaacaatattccg
atagtggactatgaaaccctgcttcaacagccggaaattaatgagcttattgccaatgat
gtggcggatcttgtgggtccccacaccggatttaaaccctttgaacgtgtgtttaagttt
aaattgctttctaaaccgttcgaagtaggccgagaattatcccataagcaagaaattatg
aggcatcgggtgatagaactctataaaaaggagatttctgagctctttgaataa
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