Gracilinema caldarium: Spica_0983
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Entry
Spica_0983 CDS
T01573
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
scd
Gracilinema caldarium
Pathway
scd00470
D-Amino acid metabolism
scd00550
Peptidoglycan biosynthesis
scd01100
Metabolic pathways
scd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spica_0983
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spica_0983
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spica_0983
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Spica_0983
Enzymes [BR:
scd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Spica_0983
Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Precursor biosynthesis
Amino acid ligase
Spica_0983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
RimK
ATP-grasp_4
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AEJ19133
UniProt:
F8F2L8
LinkDB
All DBs
Position
complement(1081156..1082286)
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AA seq
376 aa
AA seq
DB search
MGETKQTVAVIYGGRSGEHEVSLISAASVVRNLDTTKYKVLLIGIDKQGGWYLQKDDELE
RCLAGAAALEIHTDVQRRVSAVCGGETKETFSTPATGALSVDVVFPVLHGTFGEDGTIQG
LLEMVNVPYVGAGVLGSAIGMDKEIAKILWIHAGLPVVPFISVRKLDWAVSERRKQIIER
AERDFMYPLFVKPSCAGSSVGASKAQDRQSLEKAVAEALLWDDKVLIEPFIPAREVECSV
TGNERPEAYTPGEIVPTHEFYDYEAKYIDPDGAALLIPADLSENEFKTIREIAVKAYRAA
ELSGLSRIDFFVRKDTREILLNEVNTMPGFTTISMFPKMCEASGLAYADLLDRLIKLAIE
RYDQKNSRSYSYKNGK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacaaaacaaaccgtagcagtaatctatggcggccgttcgggagagcacgag
gtatccctcatttcagctgcttcagtagtacgtaatctggatacaactaaatataaggtt
cttttaattggtatagataaacaggggggctggtacctccaaaaggatgatgaacttgaa
cgttgcctagcaggagcggcggccttagaaattcatactgatgtacagcgccgggtatct
gcggtctgtggtggtgaaacaaaagaaaccttcagcacccctgctacaggcgctctatcg
gtagatgtggtttttccggtcctgcatggaacctttggcgaggatggcactattcagggg
cttctggagatggtaaatgtcccctatgtaggtgcaggggtcttgggaagtgccattggc
atggacaaggaaattgcaaaaattctctggatccatgcaggactgccggtggtgcctttc
atttcagtccgcaaactggactgggctgtatctgaaaggcggaaacaaatcattgaacgg
gccgaacgggacttcatgtatcccctctttgtaaaaccctcctgtgcaggctcttcggtt
ggagcgtccaaggctcaagacagacagagtcttgaaaaagccgtagcagaagcgctgctc
tgggatgacaaggtcctcatcgagcccttcattcccgcccgggaagtggaatgctctgtc
accgggaatgaacggcccgaagcatatactccgggggaaatcgtacccacccatgaattt
tacgattacgaagcaaaatatatcgatcccgatggggcagcccttctcataccagcggac
ctctcagaaaacgaatttaaaaccatccgggagattgcggtaaaagcctaccgggcagcg
gaactttcgggactttcccgaattgatttttttgttcgcaaagatacccgggagatactc
cttaatgaagtgaatacaatgccaggttttacgaccattagcatgtttcccaaaatgtgc
gaagcctccgggctcgcctatgcagacctgctggacaggctcatcaaattagctattgaa
cggtacgaccaaaagaattcccgcagctattcctataagaacggaaagtaa
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