Gracilinema caldarium: Spica_1404
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Entry
Spica_1404 CDS
T01573
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scd03019
]
Spica_1404
03009 Ribosome biogenesis [BR:
scd03009
]
Spica_1404
03036 Chromosome and associated proteins [BR:
scd03036
]
Spica_1404
Enzymes [BR:
scd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Spica_1404
Messenger RNA biogenesis [BR:
scd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Spica_1404
Ribosome biogenesis [BR:
scd03009
]
Eukaryotic type
90S particles
RNase
Spica_1404
Prokaryotic type
rRNA processing factors
Spica_1404
Chromosome and associated proteins [BR:
scd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Spica_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AEJ19550
UniProt:
F8F3H4
LinkDB
All DBs
Position
complement(1593775..1594524)
Genome browser
AA seq
249 aa
AA seq
DB search
MKDRSIQAVPAGSNTVNSARKQVLIDFQKTAAIRFRSLELLNLSFIHRSASNEFPQKINN
ERLEFLGDAILGACTATILYEKLSAQPEGELAKIKSVVVSEDTLAGIARELQIDVLLILG
KGEELSGGRTKKAILADALEALIGAYYLDSGYKAVFEFISKYLEVEIERVVTNQHHRDYK
TLLQEKCQQLYKNYPTYTLLKRTGPDHERMFWVEVHVNGVAYGPGIGKNKKEAEQEAAKL
AYKAITDIM
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatcgcagtatacaggcggtccccgctgggtcaaatactgtcaatagtgccaga
aaacaggtgctcattgattttcagaagaccgcagccataaggttcagaagtcttgaactt
ctgaacctttctttcattcatcgatccgcctcgaacgaatttcctcaaaaaattaataat
gaacgcctcgaatttttgggtgatgccattttgggtgcctgtacagctacgattctgtat
gagaagctatctgctcagccagagggagaattagctaaaattaaatcggttgttgtatcc
gaagataccctggcaggtattgccagggaacttcaaatagatgttcttctgattcttggc
aagggcgaagaactatctggtggaaggaccaaaaaggcaattttagccgatgctctggaa
gcattgatcggtgcctattatttagattcaggctacaaggctgtttttgaatttatcagc
aagtacctggaagtagaaattgaacgggtggtaacaaatcagcatcaccgggattataaa
acgttgctccaggaaaaatgccaacagctttataaaaactatccaacctatacgctcctc
aaacggaccggtcctgaccatgagcggatgttctgggtagaagtacacgtgaatggggtt
gcttatggtcctggcatcggcaaaaataaaaaagaagcggaacaggaagctgccaagctt
gcctataaggcgattactgatatcatgtga
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