Gracilinema caldarium: Spica_2003
Help
Entry
Spica_2003 CDS
T01573
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Spica_2003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
AEJ20131
UniProt:
F8EXW7
LinkDB
All DBs
Position
complement(2244576..2245883)
Genome browser
AA seq
435 aa
AA seq
DB search
MPNISPIFQDESHQSPGTGRKSTILWFIILGTVIVIGITGLALPSFNAVKPQTTTVVGKN
LSITAVEKKTIRDIVSVSGVLELSKKEIITSPGDGVIDQLYVQEGDQVAAGQVLLQIKTS
DLKSQLQSKQLSLEKLNYQIEQSQVIQEFTRKQYAIEIAAAKRSIEDAQRELDKVKALKD
KSLASEQDLLSAQLTLQSAQDTLAKAQINQDQAEANYQLNLKNSLADRTILEKDIRDLKD
EITAYTVRTSRGGTVYSLSVESGGTVSAYEELAVVANAGDSRAALDVPETRIGSITKGLP
VTIYIGETNYPAQVETIAPTATSSSSSSGSVVLVTAAFKSKPEKPTIGASVSGEIVAGTI
TDALVLPRGPYLSSGNYSNVYVVSNGVAKKATVKFGVADGAYIQVTSGLNEGDRVIISDY
RDFIHLDSFPVEETK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatataagtcctatctttcaggatgaatcgcatcagtcaccaggaactggtcga
aaatccacgattctctggtttatcatcctggggactgtcatagttattggtattacaggt
ttggcactcccgagttttaatgctgtaaagccgcagactactactgttgtaggaaaaaat
ctctctataacagcagtagaaaagaaaactatacgggatattgtttctgtttcgggtgtt
ctagagctttctaaaaaagagattatcacctcccctggagacggggttatcgatcagctc
tatgtacaggaaggtgatcaggtagccgctgggcaggtattgcttcagattaaaacatct
gatctgaaatctcaattacagagtaagcaattatctctggaaaaattaaactaccaaatt
gaacaatctcaggttattcaggaatttacccgtaaacagtatgctatagaaatcgccgct
gcgaaacgatctatagaagatgctcaacgtgaacttgataaagttaaagcattaaaggat
aaaagccttgcttctgaacaggatctattatcagcacagttaacattacagagtgctcaa
gatactctagctaaggctcagattaatcaagatcaggctgaagcaaactatcagttgaat
ttaaaaaattctttggcagatcgtaccattttagaaaaggatattagggacttaaaagat
gagatcaccgcctatacggttcgcacgagccggggcggcacggtttacagtctttcggta
gaatctggcggtactgtaagcgcctatgaagaactagcagtggtggctaatgctggtgat
agccgtgccgccctggatgtgccggagacaagaataggatccataacgaaggggctaccg
gtgactatatacattggagaaactaattatcccgcacaggtagaaaccattgcacctact
gctacgagttcttccagttcttctggctcagttgttctagttactgcagcctttaagtct
aaacctgaaaagcctactattggagcttctgtgtctggagaaattgttgcaggaacgatt
acagatgccctggtgttaccccggggcccctacctatccagtgggaactatagcaatgtt
tatgtggtctctaatggagtagctaaaaaagcaaccgtaaagtttggtgtggccgatgga
gcatatattcaggtaacttcaggtcttaatgaaggtgatcgggtcattatttcggactat
cgtgattttatccatctggattctttcccggtagaagaaactaaataa
DBGET
integrated database retrieval system