Saccharomyces cerevisiae (budding yeast): YNL021W
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Entry
YNL021W CDS
T00005
Symbol
HDA1
Name
(RefSeq) histone deacetylase HDA1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sce01009
]
YNL021W (HDA1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YNL021W (HDA1)
04131 Membrane trafficking [BR:
sce04131
]
YNL021W (HDA1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YNL021W (HDA1)
Enzymes [BR:
sce01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
YNL021W (HDA1)
Protein phosphatases and associated proteins [BR:
sce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
YNL021W (HDA1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
YNL021W (HDA1)
Membrane trafficking [BR:
sce04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
YNL021W (HDA1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
YNL021W (HDA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
855710
NCBI-ProteinID:
NP_014377
SGD:
S000004966
UniProt:
P53973
Structure
PDB
LinkDB
All DBs
Position
XIV:593227..595347
Genome browser
AA seq
706 aa
AA seq
DB search
MDSVMVKKEVLENPDHDLKRKLEENKEEENSLSTTSKSKRQVIVPVCMPKIHYSPLKTGL
CYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLK
IPVRAATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGG
AIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIM
ILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNIT
WPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTH
MLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLSDPKPEVIEMIDKV
IRLQSKYWNCFRRRHANSGCNFNEPINDSIISKNFPLQKAIRQQQQHYLSDEFNFVTLPL
VSMDLPDNTVLCTPNISESNTIIIVVHDTSDIWAKRNVISGTIDLSSSVIIDNSLDFIKW
GLDRKYGIIDVNIPLTLFEPDNYSGMITSQEVLIYLWDNYIKYFPSVAKIAFIGIGDSYS
GIVHLLGHRDTRAVTKTVINFLGDKQLKPLVPLVDETLSEWYFKNSLIFSNNSHQCWKEN
ESRKPRKKFGRVLRCDTDGLNNIIEERFEEATDFILDSFEEWSDEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaatggttaagaaagaagtactggaaaatccagaccatgatttaaaaaga
aagctagaagagaacaaagaagaagagaatagcctctctactacttctaaaagtaaaagg
caggttattgttcccgtttgcatgccaaaaatccattattcaccgctgaaaactggtctt
tgctatgacgttagaatgaggtatcatgcaaagattttcacatcgtacttcgagtacatt
gatccacatccagaggacccaagaagaatatatcgtatttataaaatactagcagagaat
ggtctgattaacgaccccactttaagcggcgtggatgaccttggtgatttaatgctgaag
atacctgtaagagccgcaacctccgaagaaatcttggaagttcatacaaaggaacattta
gagtttattgaaagcacagaaaaaatgagccgagaagagttattaaaagagactgaaaaa
ggtgattccgtatatttcaataatgattcttacgcgagtgctaggctgccttgtggtggc
gccattgaagcatgcaaggcggttgtcgaggggcgtgtaaaaaactctctagctgtcgta
agaccacctggccatcatgcagagcctcaagctgcgggtggtttttgtctcttcagtaat
gttgctgttgctgccaagaatatcttaaagaactacccagaaagtgtaagaaggataatg
attttagattgggatattcatcatggtaatggcacacaaaagtcattctatcaagacgat
caggtgctatatgtgtcattacacagatttgaaatgggtaaatactatcctgggaccatc
caaggacaatatgatcaaactggtgagggtaagggtgaaggattcaattgtaatattact
tggccggtcggcggtgttggtgatgcagaatatatgtgggcatttgaacaggtagttatg
cctatggggagagaattcaagcctgacttggtgattatttcttcagggtttgatgccgcg
gatggtgatactatcggacaatgtcatgtcaccccaagttgttatggacacatgacacat
atgttaaaatctctagctagaggtaatctttgtgtagttttggaaggtggatataacttg
gatgcgattgcaagaagcgctttgagtgtagcaaaagtactaataggggagcctcctgat
gaactacctgatccattaagtgatcccaagcctgaggtcatagaaatgatagacaaagta
attcggttacagtccaagtattggaactgttttagaaggagacatgctaactccggttgt
aattttaacgaacctattaacgactcgataatatctaaaaattttcctctgcagaaggct
attcgtcaacaacagcaacactatttaagcgacgaatttaatttcgttactttaccgtta
gtaagcatggatttaccagataatacagtgctatgtactccaaacatttccgaatctaac
actataattatagtcgttcatgatacttctgatatctgggcaaagagaaatgttatttca
ggtacaattgacttatcctcatcagttatcattgataattctctagactttatcaaatgg
ggacttgacaggaaatacggcatcattgatgtaaatatacctctaactctgtttgaacct
gacaattactcaggaatgattacatcccaagaagttctaatatatttatgggataactac
atcaagtattttccttctgttgccaaaattgcttttattggaataggagactcatactca
ggtatcgtacatctgcttggtcacagggatactagggctgttactaaaacggtaattaat
ttcttgggagacaagcagttaaagccactagttcctctagtagatgaaacattgagtgaa
tggtacttcaaaaactcacttatattttcaaacaatagccaccaatgctggaaagaaaat
gaaagcagaaaaccaagaaaaaaattcggtagagttttgagatgtgatacggacgggtta
aacaatataattgaagaaagatttgaagaggctacagactttatactggattcgtttgaa
gaatggagtgatgaagaatga
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