Sphingobium chlorophenolicum: Sphch_1249
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Entry
Sphch_1249 CDS
T01522
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sch03016
]
Sphch_1249
Enzymes [BR:
sch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sphch_1249
Transfer RNA biogenesis [BR:
sch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sphch_1249
Prokaryotic type
Sphch_1249
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AEG48938
UniProt:
F6EW59
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All DBs
Position
1:complement(1352001..1352951)
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AA seq
316 aa
AA seq
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MHGWIILDKPLWLGSTQAVSAVKRALRQSGAGKWKVGHGGTLDPLATGVLPIAIGEATKL
AGRMLDSDKIYDFTVSFGVQTDTLDLEGKEIAASDHRPTLANVEAILPRFTGPIEQAPPA
YSAILIDGQRAYDLARAGQDVEMKTRAIIIHNLAISSPQRGEDSAACPQGGLAKLGEGAA
AEKINEITFTAHVSKGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLESAISLDKLDE
AVRGGGIAQLMLPLTAGLDDIPALAVSPDDALALRQGKVLVGKPHTGLMLAMEGDTPVAL
VEASGPEIRVVRGFNL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgacaaacccttgtggctaggctccacccaggcggtgagc
gcggtcaagcgcgccctgcggcaaagcggcgcgggcaaatggaaggtcggccatggcggc
acgctcgacccgctggcgaccggcgtcctgcccatcgcgatcggggaggcgaccaaactc
gccgggcggatgctcgacagcgataaaatctatgatttcaccgtcagcttcggcgtccag
accgacacgctcgatctggagggcaaggaaatcgccgccagcgaccatcgcccgacgctg
gcgaatgtggaggcgatcttgccccgcttcaccggcccgatcgagcaggctcccccggcc
tatagcgccatcctgatcgacggccagcgcgcctacgacctcgcccgcgccggtcaggac
gtggaaatgaagacccgcgccatcatcatccacaacctcgccatctcctcgccccaacgg
ggagaggatagcgcagcttgcccgcaaggcgggctggcgaagcttggagagggggctgcc
gcagagaagatcaacgaaatcaccttcaccgcccatgtctccaagggcacctatatccgc
tcgctcgcccgcgacatcgcgctggcgctcggcacggtcggtcatgtcaccatgctccgc
cgcgtgaaggcaggccccttcaccctggaatccgcgatttcactggacaaattggacgaa
gctgttaggggcggcggcatcgcgcagcttatgctgccgttgaccgcagggctggacgac
atcccggctctcgcagtctctcccgacgatgcgctggctctccgacaggggaaggtgctc
gtggggaaaccgcataccggtctcatgctggcgatggagggcgatacgcccgtcgcgctg
gtggaggccagtggcccggaaatccgggtggtgcgcggctttaatctctaa
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