Sphingobium chlorophenolicum: Sphch_1419
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Entry
Sphch_1419 CDS
T01522
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch00470
D-Amino acid metabolism
sch00550
Peptidoglycan biosynthesis
sch01100
Metabolic pathways
sch01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sphch_1419
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sphch_1419
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sphch_1419
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sch01011
]
Sphch_1419
Enzymes [BR:
sch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sphch_1419
Peptidoglycan biosynthesis and degradation proteins [BR:
sch01011
]
Precursor biosynthesis
Amino acid ligase
Sphch_1419
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AEG49108
UniProt:
F6EXN2
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All DBs
Position
1:complement(1538868..1539818)
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AA seq
316 aa
AA seq
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MTRGPWHVAVLMGGWSAERLVSLSSGEGVAKALESRGHRVTRIDMDRDVALRLSETRPDV
VFNALHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGHIV
PSASLFEGDPLPRPYVVKPVNEGSSVGVAIVTEGGNYGSPIGRDVEGPWLHFDELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPAGIPQEIGEACKAIAL
RAHQLLGCKGASRSDFRWDDTQGVEGLFLLEVNTQPGMTPLSLVPEQAAKLGIDYAELVE
RIVEDALGAAKGAKHG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtggcccatggcatgttgccgtcctgatgggcggctggtccgccgagcggctg
gtttcgctctcgtcgggcgagggcgtcgccaaggcgctggaatcgcgggggcatcgggtc
acgcgcatcgacatggatcgcgacgtcgcgctgcggctttccgaaaccaggcctgatgtt
gtgttcaatgccctccatggcgttccgggcgaggatggcacggtgcagggcatgatggac
ctgatggggctgacctacacccattcaggcctcgccacctccgtcatcgcaatcgacaag
cagcttaccaagcaggcgctggtgccccatggcatccccatgccgggcggccatatcgtg
ccaagcgccagcctgttcgagggtgatcccctgccgcgcccctatgtggtgaagccggtc
aatgaaggcagttcggtcggcgtcgccatcgtgacggagggtggtaattacggttcgcct
atcggccgcgatgtcgaggggccatggctgcatttcgatgaactgctggccgagccctat
attcgcggtcgggaattgacgactgccgtgctgggcgacgaagcgttgcttgtaacggaa
ctcaggcccaaaagcggcttctacgatttcgacgccaaatataccgacggcatgaccgaa
catgtctgcccggccggcattccccaagagatcggcgaagcctgcaaggcgattgccctg
cgcgcgcatcagttgctgggatgcaagggcgcctctcgctccgacttccgctgggacgac
actcagggggtcgaggggctgttcctgctggaagtgaacactcagcccggcatgacgccg
ctcagcctggtgcccgaacaagcggcgaagctgggcattgactatgccgaactggtggag
cgtattgtcgaggacgcgctcggggcagcaaagggggcgaagcatggctga
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