Sphingobium chlorophenolicum: Sphch_2436
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Entry
Sphch_2436 CDS
T01522
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sphch_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_2436
Enzymes [BR:
sch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sphch_2436
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sphch_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG50094
UniProt:
F6EYP4
LinkDB
All DBs
Position
1:complement(2595100..2596497)
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AA seq
465 aa
AA seq
DB search
MYCVRLNGLDDFDGWRRAARAFALAGIAPADIVWQGDAEAGDLFAAETPPPTADDARFSV
PRAFVELAEVAILHRDPQRFALLYALLVQLRERPASLEDRADPLVRRVEGLAKAVRRDMH
KMRAFVRFRELADAEGPRFIAWFEPEHHIVRANAGFFVRRFASMRWSILTPEIGVHWDGE
TLTEGPGATRGDVPADDPVEDIWKGYYAAIFNPARLKIGAMLSEMPRKYWRNLPEAALIP
ELVAGAQAREAAMIATPARPAARRGNAAPAWQALRDEAMGCTRCPLYRDTTQTVFGEGPV
DAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDRALEEAGIDRRQAYVTNAVKHFKHERRGK
RRIHQTPETPEIQACRWWLTQELELIRPRIIVALGATAGRALLGKAVTISRVRGAPIALE
GGAQGWITVHPSYLLRVPDEARKAEERKRFVEELREIGEQVKASP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtattgcgttcggctgaacggcctggacgatttcgatggatggcgccgcgccgcccgt
gccttcgcgctggcgggaatcgctccggccgacatcgtctggcagggggatgcggaggct
ggcgatcttttcgccgctgagacaccgccgccgacagcggacgacgcccgcttttccgtc
ccgcgcgcctttgtcgagttggccgaagtcgcgattctgcatcgcgacccgcaacgcttt
gccctgctttatgcgctgctcgtgcagttgcgggagcgtccggccagcctggaggaccgc
gccgatccgctggtccgccgggtggaggggctggcaaaggcggtgcggagggacatgcac
aagatgcgcgccttcgtccgcttccgggaactggcggatgcggaagggccgcgcttcatc
gcctggttcgaaccggagcatcacatcgtccgggccaatgcgggcttcttcgtccgccgc
ttcgcatccatgcgctggtcgatcctgacgccggagatcggcgtccattgggatggagag
acgttgaccgaggggccgggcgcgacccgcggcgacgtgccggcggacgacccggtcgag
gacatctggaagggctattatgcggcaatcttcaacccggcgcggctcaagatcggcgcc
atgctgtccgaaatgccgcgcaaatattggcgcaacctgcccgaagccgcgctcataccg
gaattggtggcgggcgcgcaggcgcgggaggcggccatgatcgcgacccccgccaggcct
gcggcccgacgcggcaatgccgcccccgcctggcaggcgctgcgtgatgaggcgatgggc
tgcacccgctgcccgctataccgggatacgacgcagacggtgttcggcgaggggccagtc
gacgccccgctgatgttcatcggcgaacagccgggcgatcaggaggatctggccgggcgg
ccctttgtcggacccgccgggcagttgttcgaccgggcgttggaggaagcggggatcgac
cgtcgccaggcctatgtcaccaatgcggtgaagcatttcaagcatgagcgacgcggcaaa
aggcgcattcatcagacgccggagacgccggaaatccaggcctgccgttggtggctgacg
caggagttggagttgatccggccccggatcatcgtcgctttgggggctaccgcaggccgc
gcgctgctgggcaaggcggtgacgatcagccgggttcgcggcgcgccgattgcgttggag
ggcggcgcgcagggctggatcacggtgcatcccagctatttgctgcgcgtgcccgatgaa
gcgcgcaaggcggaggaaaggaagcgcttcgtcgaggagttgcgcgagattggagagcag
gtgaaggcgtcaccctga
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