Sphingobium chlorophenolicum: Sphch_4123
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Entry
Sphch_4123 CDS
T01522
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sch03036
]
Sphch_4123
Chromosome and associated proteins [BR:
sch03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Sphch_4123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEG51702
UniProt:
F6F443
LinkDB
All DBs
Position
pSPHCH01:50159..54358
Genome browser
AA seq
1399 aa
AA seq
DB search
MATHPLALTLPLDDPARTAAQGIADRLSEGCPVARNDLLAEMTSAFGGSSADGLWSLRDA
YDVLELAQVLHLKNATLPADANARLAQLIAMTAALPTQSVRSETQIAFQQFSTPAPIGFL
AAKAAAITAHDIVLEPSAGTGLLAVHAHLAGARLLLNDIDAWRTRLLRHAFPEGRLSTHD
GELIDDMLDPQLVPSVVLLNPPFSRSQGRARDRHAALRHLRSALLRLAPGGRCAVILPDR
IETEDADWLHATAGAHARLHLDLPPDAYAKHGTGQAVQLILLEKDGAGGSVPRQTCTTLG
AALAAIDAMATPCAPQPQPISRPSGLFRGLTRRTRPVCSRAAVTLPTTRAVAYHRLDAPA
PAGEPQGIYLPYRPSRLLIADAREHPSALVESQAMGSIAAPPVAYEPVLPARILDDGLLS
DAQLETLIYAGAAFERDLPGRFISSEEGLSLSPAEAGNAYRTGFFLGDGTGAGKGRQVAG
VILDQWLRGNRRHLWISKSETLVEDARRDWSALGGLPLDIQHLNQWKLGTPIALGDGILF
LTYATLRSNRGDRGTRLRQLIEWMGEDFSGVIVFDEAHEMAGVAGGEGRFGATKGSEQGI
AGVRLQNLAPRARILYASATGASDVNNLAYATRLGLWGPQTAFADRRAFVESLRRGGIAA
MELIARDLKAQGLYAARALSFAGVEYDILEHRLSEEQIAVYNAYADAWAIIHNNLQAALA
ATRVTDGFSGATYNSGAKAAALSIFESTKQRFFGQILLSMKLPSLIPAIAADLARGDCAV
VQLVSTSEAMLDRALADLSPEERAWLDIELSPREFLVDYLTAAFPVRQMRTYTDDSGTVR
SEPMIDEAGQPVLCREAMAMRDQLLEQLCALPVVGSALDHIIGHFGTEAVAEVTGRSRRI
VVDADGRQRIERRSARTNLAETDIFMRGEKRILIFSDAGGTGRSYHASLDAPNQSRRIHY
LLEPGWRADAAIQGLGRTHRTHQACPPLFRPVSTDCRGERRFISTIARRLDSLGALTRGQ
RQTGGQGLFDPRDNLESDFARESLDQWFRLLFQAKLQSVHFDQFQALTGLNLAGEGGGLT
ETLPTIQRWLNRILALRIDLQNAIFDEYLGLIEARVEKAREAGTLDLGVETIAADRISIL
DRTVIRRDPVSGAETEILRIETEERYRPLTLERAHWLLADPEARGLINPRSGKAAICRPT
FSLTDEEGRTVRRYELVRPTRTERHRQDLFAETHWTDVDRASFDEAWQAECDAMAAQTRT
QIIYLVTGLLLPVWGKLPDDHVQVWRLTSDDGQSLLGRLIPAPLVERIASAFGIAAHVEI
DLGARVEHVRTSGEIMPIGALRLKRALVAGDQRLELLDWKPEALPHLKAAGCFTEIIQHR
TRLFVPPSRALEILARITD
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaccccctcgcgctcacgctgccgctcgatgatcccgcccgtaccgctgct
caaggcatagccgaccggctgtccgaaggatgtccggttgcacgtaacgacctccttgcc
gaaatgacctccgctttcggtggctcgagcgccgatggcctgtggtcattgcgcgacgcc
tacgatgtgctcgaactcgcgcaggtcctccatctgaagaacgcgacgctcccggcagat
gcgaatgcgcggctcgcccagctgatcgctatgacggcggcgcttcccacgcaaagcgtg
cgtagcgaaacgcagatcgcgttccagcaattctcgacaccggcgccgatcggcttcctt
gccgccaaggcagccgcgatcacggcacacgatatcgtgctcgagccctcggccgggacc
ggcctcctggccgtacacgcccatctcgccggcgcgcgcctccttctcaatgatatcgat
gcctggcgcacgcgtttgctgcgtcacgcctttcccgaaggcaggctgagcacgcatgat
ggcgaactgatcgacgatatgctcgatccgcaactggtgccgagcgtcgtgctcctcaat
ccgcccttctcgcgaagccaggggcgcgcgcgcgatcgccatgccgcgcttcgccatttg
cgctccgcgctgttgcggcttgctccaggcgggcgctgcgccgttattctccccgaccgc
atcgagacggaggacgcggattggctgcacgccactgcgggcgcgcatgcccggctgcat
ctcgacctgccgcccgatgcctatgccaagcacggcaccggccaggcagtccagctcata
ctcctcgaaaaggacggggcagggggctcggtcccgcgccagacctgcacgacgctcggc
gctgcgcttgcggccatcgatgcgatggcgaccccatgcgcgccgcagccgcagccgatc
tcccgccccagcggattgttccggggcctcacgcggcggacccgccccgtctgctcgcgt
gcggcggtgaccctgcccacgacccgcgcggtcgcctatcaccgtctcgacgcgcccgca
cccgcgggcgaaccgcaagggatttacctgccctatcggccgagccgtctgctgattgcc
gatgctcgtgagcacccaagcgcgctggtcgaatcgcaggcaatgggatcgattgccgca
cccccggtcgcttatgaacccgtgctgccggccaggatcctggacgacggcctgctctcg
gacgcgcagctcgaaacgctgatctacgctggcgcggcgttcgagcgcgatcttcccggg
cggttcatatccagcgaggagggtctttcgctgtcgccggcagaggccggtaacgcctat
cggaccggctttttccttggcgatggcacgggcgccggcaaggggcggcaggtggcaggc
gtcatcctcgaccagtggttgcgtggcaaccgccgccacctctggatatccaagagcgag
acgctggtcgaagacgctcgccgggactggtcggcgcttggcggcttgccgctcgacatc
cagcatctcaaccagtggaagctcggcaccccgatcgcgctgggcgatgggatcctcttc
ctgacctatgccaccctgcgctccaaccgcggcgacaggggcacgcggctgcgccagctg
atcgaatggatgggtgaggatttcagcggcgtcatcgttttcgacgaggcgcatgaaatg
gccggggtggccggcggcgagggccggttcggcgccacgaaagggtccgagcagggcatt
gccggcgtccgcctgcaaaatctcgctccgcgcgcccggattctctacgcctcggcgacg
ggcgcctcggatgtcaacaatcttgcctatgcgacacgcctcggattgtggggaccgcag
acggccttcgccgaccggcgggccttcgtggaatccctgcgccgaggcggcatcgcggcg
atggagttgatcgcccgcgacctcaaagcgcagggcctctatgccgcgcgggcgctcagc
ttcgccggcgtcgaatatgacatcctcgagcatcggctcagcgaagaacagatcgccgtc
tacaatgcctatgccgatgcctgggcgatcattcacaacaatctgcaggccgcgctcgcc
gccacgcgcgtcaccgacggcttcagcggtgccacctataatagcggcgcgaaggccgcg
gcattgtcgatcttcgaatcgaccaagcaacgcttcttcggccagatcctgctgtcgatg
aagctgccctcgctgatcccggcgatcgccgccgatctcgcgcgcggcgactgcgccgtc
gtccagctcgtgtcgacctcggaagcgatgctcgatcgtgcccttgccgacctgtccccc
gaggagcgcgcctggctcgatatcgagctgtccccgcgcgaattcctggtcgattatctg
accgcggcctttcccgtgcgccagatgcgcacctataccgacgatagcggcacggtgcgc
tcggaaccgatgatcgacgaggccgggcagcccgtgctgtgccgggaagcgatggccatg
cgcgaccagctcctcgagcaactctgtgcgctgccggtcgtcggctcggcgctcgatcac
ataatcgggcatttcgggacggaggctgtggccgaggtgacgggccgcagccggcggatc
gtcgtcgatgccgacggccgtcagcggatcgaacggcgcagcgcgcgcacgaacctcgcg
gagaccgacatcttcatgcgcggcgaaaagcgcatcctgatcttctccgacgccggcggc
acggggcggagttaccacgccagcctcgacgcgcccaatcagagccgccgcattcactat
ctcctcgagcccggttggcgcgcggacgcggcgatccaggggctgggccgcacgcaccgc
acccaccaagcctgcccgcccttgtttcggcccgtttccaccgattgccgtggcgaacgg
cggttcatctcgaccatcgcccggcgcctcgacagcctgggcgcgctgacccgtggccaa
cgccagaccggcgggcagggacttttcgacccccgcgacaatctggagtccgacttcgcg
cgggaatcgctcgaccagtggtttcgcctgctgttccaggcaaaactccaatcggtccac
ttcgatcagttccaggcgctcaccggtttgaacctggccggggagggcggggggctcacc
gagaccttgcccacgatccagcggtggttgaaccgcatcctggcgctgcgcatcgacctg
cagaacgcgatcttcgacgaatatctcggcttgatcgaagcacgggtggaaaaggcacgc
gaggccggcaccctcgatcttggcgtcgaaacgatcgcggccgaccgtatttcgatcctc
gaccggacggtgatccggcgcgatcccgtgagcggcgccgaaaccgagatcctgcgtatc
gaaaccgaggagcgatatcggccgctgaccctggagcgagcgcattggcttctggccgac
ccggaagcgcgcgggttgatcaacccgcgttccggcaaggccgccatttgccggccgacc
ttctcgctgacggacgaagaggggcggaccgtgcgccgctatgagctggtgcggccgacg
cgcaccgaacggcaccggcaggacctcttcgccgaaacccattggaccgacgtggaccgg
gcgagcttcgacgaagcctggcaggccgaatgcgacgcaatggcggcgcagacgcgcacg
cagatcatctatctggtcactggcctgctgcttccggtgtggggcaagctgcccgacgat
catgtccaggtctggcggctgacgagcgatgacggccagtcgcttctcgggcgtcttatt
ccggcgccgctggttgagcggattgccagcgcattcggcatcgcggcccatgtcgagatc
gacctcggcgcgcgggtcgagcacgtccgcacctcgggcgagatcatgccgatcggagcg
ctgcggctgaagcgcgccttggtcgccggcgatcaacgcctcgaattgctggactggaag
cccgaggcgctgccgcatctcaaggcggcgggctgcttcaccgagatcatccagcaccgc
acgcggctgttcgttcccccgagccgcgccctcgagatcctcgccaggatcacggactga
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