Streptomyces chartreusis: CP983_08080
Help
Entry
CP983_08080 CDS
T07157
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
scha
Streptomyces chartreusis
Pathway
scha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CP983_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scha03400
]
CP983_08080
Enzymes [BR:
scha01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CP983_08080
DNA repair and recombination proteins [BR:
scha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CP983_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QEV66635
UniProt:
A0A8E3TI24
LinkDB
All DBs
Position
complement(1942851..1943777)
Genome browser
AA seq
308 aa
AA seq
DB search
MTDGGTRRVRAGRRTVEVKRVDKVLLPGSGDAKEYTKGDLVDYHRSVARFMLPHLRGRPL
MLERHPDGLDGPEFMQKNTPEHYPDWITRVEVSKEDGTVRHTVCDDTASLLYLTDQACLT
LHRWLSRTCSIDCPDRLVFDLDPADDDFGQVREAAGFLGELLDELELPSAPMTTGSRGLH
IVVPLTARQDCDEVGKFARDVADTLTAAHPDRLTTAARKKDRGDRLYLDVQRNAYAQTVV
APYTVRARPGAPVATPIGWADLDDPDLHARRWTIADAVEKARSDPWAGLMRRARALGPAR
RRLDSLKG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggcggtaccaggagagtgcgggcaggccgccgtaccgtcgaggtcaaacgg
gtcgacaaggtgctcttgcccggttccggggacgcgaaggagtacaccaagggcgacctc
gtcgactaccaccgctccgtcgcccggttcatgctgccgcatctgcggggccgcccgctg
atgctggaacggcaccccgacgggctggacgggcccgagttcatgcagaagaacaccccg
gagcactacccggactggatcacccgggtagaggtgtccaaggaggacggcaccgtccgc
cacacggtctgcgacgacaccgcgagtctcctgtacctcaccgaccaggcctgcctcacg
ctgcaccgctggctctcccgcacctgcagtatcgactgccccgaccggctggtcttcgac
ctcgacccggccgacgacgacttcggacaggtccgggaggccgccgggttcctcggcgaa
ctgctcgacgaactggagctgccctcggcgccgatgaccaccggttcacgcgggttgcac
atcgtcgtgccattgacggcacgtcaggactgcgacgaggtagggaagttcgcgcgggac
gtcgccgacacgctcaccgcggcccacccggaccggctcaccaccgccgcccgcaagaag
gaccgcggcgaccgcctctacctcgacgtgcagcgcaacgcctatgcacagacggtggtc
gcgccctacacggtccgcgcccgccccggagcccccgtggccacgccgatcggctgggcc
gacctggacgacccggacctccacgcgcggcgctggaccatcgccgacgccgtggaaaag
gcgcgcagcgacccgtgggccgggctgatgcgccgggcccgtgctctcgggccggcgcgc
cgcaggctcgactcgctcaagggctga
DBGET
integrated database retrieval system
