Shewanella chilikensis: GII14_04180
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Entry
GII14_04180 CDS
T08813
Name
(GenBank) AAA domain-containing protein
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schk03000
]
GII14_04180
Transcription factors [BR:
schk03000
]
Prokaryotic type
Helix-turn-helix
Other families
GII14_04180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
AAA_16
AAA
GAF
GAF_2
AAA_19
DUF5624
Torsin
TIP49
Motif
Other DBs
NCBI-ProteinID:
QIJ03457
UniProt:
A0A6G7LNU0
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All DBs
Position
906308..907864
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AA seq
518 aa
AA seq
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MVTEQWLEQAAKLLECQQFDGLLQQFLDTLALELGLDNHLFLAPGFDGRELKPLSCLGLC
EGISLQALCLAVTDFRHPFAHVLQTGEAMLLNKARLAYWQEHSGFVSLCDRVGKEQALLL
FPLSHEGHVRAILCLRLAEQQGSGLLVRQDWQQYAAVFMRHWQLLDKLLRQNSDQSQLSS
SLDELRRQQQQHDAMQQLGKNLVGDSQAMSQLRQEIVRGAASQLSVLVQGETGTGKELVA
RAIHDFSERSGKPFVAINCAAIPENLLESELFGYAKGAFSGADKDKQGLIAQAHQGTLFL
DEIGDMPLNLQSKLLRVLETGHYRALGGNKEIYADFRLVAATHVNLKEQIHSGEFRRDLF
YRLCQFPLQVPALRERLEDIPDLAAHFIALFNQSQQRQIPGIRFIALNRLKNHGYPGNVR
ELRNMLDYACALTADGVEIDTASLPATDSEMPKPQLPTEEGQEFEAISDLRLAVAQFERA
VISARLKACNGDRAKAAVSLGMPKRTFSHKCQKLEINE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtggtgactgagcagtggttggaacaggcggcaaaattgctggaatgccagcagtttgat
gggctgttgcagcagtttctcgatactttggcattggagttggggctggataaccatttg
tttctggcgccgggcttcgatggtcgggaactcaagccactgtcctgccttggcctgtgc
gaagggatctcattgcaggcgctttgtttggcggttaccgactttcgtcatccgtttgcc
catgtgttgcagacaggcgaagccatgctgctgaacaaggcccggctcgcctactggcag
gagcacagcggctttgtcagcctgtgcgatcgggtcggcaaggagcaggcactgctgctt
ttcccgctgagccatgagggccatgtgcgggctatcctctgcctgcgtctggccgagcaa
cagggcagtggtctgcttgtccgtcaggactggcagcaatatgccgccgtgtttatgcgc
cactggcagttgctggataagttgttgcggcagaattcagatcagtctcagctgtcgagc
tcgctcgatgaactgcgtcgccagcagcaacaacatgatgccatgcaacaacttggcaag
aacctggtgggcgacagccaggccatgagtcagctcaggcaggagatagtgcgcggcgcg
gcctcacaattgtctgtgttggtgcagggtgaaacggggacgggcaaagaactggtggcc
cgggcgatacacgacttttccgagcgcagcggcaaacctttcgtggcgatcaactgcgcc
gcaataccggaaaacctgctggagtccgagctgttcggttatgccaagggggccttttcc
ggtgccgacaaggataagcaggggctgatagcccaggcgcaccagggcacgcttttttta
gatgaaatcggtgatatgcctttgaatctgcagtccaagttactgcgggtattggaaaca
ggacactaccgggcactgggaggcaacaaggagatctacgccgattttcgcttggtggcc
gctacccatgtgaacctcaaggagcagatccacagtggcgagttccgtcgcgatctcttc
taccgcttgtgccagtttccactgcaggtaccggcgctcagggagcggctcgaggatatc
cccgatttggcggcgcactttattgcactgttcaatcagagtcagcagcgacagatcccc
ggcatccgcttcattgccctcaatcggctgaagaaccacggctacccgggcaatgtccgc
gagctgcgcaatatgctggattatgcctgcgccctcacagccgacggtgtcgagatagat
accgcgtctttgccggcgacggattcggaaatgcccaagccgcaattgcctaccgaagag
gggcaggagtttgaggccatttccgatctcaggctggcggtagctcagtttgagcgggcg
gtgatcagcgccagattgaaggcctgcaacggtgacagagccaaggcggctgtcagtctg
ggaatgccgaaacgcaccttttcccacaaatgccagaagttggagattaacgaataa
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