Siniperca chuatsi (mandarin fish): 122861603
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Entry
122861603 CDS
T08948
Symbol
optc
Name
(RefSeq) opticin isoform X1
KO
K08127
epiphycan
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
schu00535
]
122861603 (optc)
Proteoglycans [BR:
schu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
122861603 (optc)
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Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
122861603
NCBI-ProteinID:
XP_044022201
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Position
LG2:35418510..35437082
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AA seq
364 aa
AA seq
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MKQQRTATGVEEFNVVESSEANSRNKAQVVSMFELRMSLMVALGLVLVFLRPYPGMAAPP
GVPDDEAFDLENYDLNSEMDWENLDVNIYGDSYDYDDLDQEGGQIEVGTVAPDTPPPANQ
PTAEGYEEEVTLSNLPPAPVTLDFKGPGLFGPETGLGMPTCLLCVCIGGSVYCDDMGLDQ
IPLLPKDTTHFYGRFNKIRHVKNTDFINLNKLQSVDLTGNQISGMDEDVFRSLPQLQQLL
LADNNLQVMPEMPITMKHIDLRNNRLISRGVHSEGFKDMSQLEFLYLSNNNLDYIPTPLP
LRLRVLHLQNNNIQSLHDDTFCNRHDRNFIRRNLEDIRLDGNPLNINLFAQAYVCLPRLP
VGSH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcaaagaacagcaacaggagtagaagaatttaatgttgtggagtcttcagaa
gctaacagcagaaacaaagcacaggtagtctccatgtttgagctgaggatgtctctgatg
gtggctcttggcttggtcctggtcttcctgcgcccctaccctggcatggctgcccctcca
ggtgtgccagatgatgaagcttttgaccttgagaactacgacctgaacagtgagatggac
tgggaaaacctggacgtcaacatttatggagacagttatgattatgatgacttggatcaa
gagggaggacagattgaggtgggcaccgtagcaccagacacccccccaccagccaaccag
cccacagctgaaggctatgaggaggaggtgaccctgtccaatctgcctccagctcctgtc
accctggacttcaagggaccaggtctctttggccctgagactggcctgggtatgcctacc
tgcctactgtgtgtgtgtattggtgggagtgtgtactgtgatgacatgggcctggaccag
atcccactcctgcccaaagacaccacacatttttatggccgcttcaacaagatccgacat
gtcaagaacacagactttatcaacctcaataagctgcagtccgttgatctaacagggaac
cagatatcagggatggatgaggatgtgtttcgctctctgccgcagctccagcagttactg
ttggctgataacaacctgcaggtcatgcctgagatgccaatcaccatgaaacacattgat
ctacgtaacaacaggctgatcagtcgtggggtacattctgagggattcaaggatatgagc
cagctagaattcctctatctgtccaacaataatctggattacattcccacaccactgcca
ctgagactgagagtgttacacctgcagaacaacaacatccagtctctgcatgacgacacc
ttctgtaaccgccatgatcgtaacttcatccgccgtaacctggaggatatccgtctggat
ggcaaccccctgaacatcaacctgtttgctcaggcctacgtctgcctgccgcgcctgcct
gtagggagtcactga
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