Siniperca chuatsi (mandarin fish): 122871257
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Entry
122871257 CDS
T08948
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122871257 (scube1)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122871257 (scube1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
DUF6821
Motif
Other DBs
NCBI-GeneID:
122871257
NCBI-ProteinID:
XP_044042092
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All DBs
Position
LG23:complement(23442926..23597877)
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AA seq
1033 aa
AA seq
DB search
MGSACFSRDVCLFVLLINTCRVMGNVGLADADECTEGSDDCHIDAICQNTPKSYNCICKP
GYKGDGKQCEDMDECENDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCMDVDECLDN
NGGCQQVCVNTMGSYECQCTEGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICREAPGKG
GVSCECRPGFELAKNQKDCTLTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDSKTCIE
KDEAAIESSEFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTL
QPDGKTCKDIDECQENNGGCDHFCRNTVGSFECSCQKGHKLLTDERTCQDIDECSFERTC
DHTCINYPGSFECLCNKGYILYGLTHCGDIDECSISNGSCEYGCINNQGSYECVCPPGQK
LHWNKKDCIGGCHGDVTYVCSSEAVKCLPNGKPAPRAQLTCTKSGGAEVCSLSCPSNALF
LTDSENSYTLSCGVPVQPSKAPQKRNATAALPTCADTLAPPIKQKARFKIKDAKCHLRPR
NKEKHRDSSKQSLQGGQFPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEME
MKEEDASDSCNVDCVRERMKQKLQSAMRTLRKSINKQQFYIQFSGTEYEVAQKPSRVPEG
AEACSTGQILRDGKCVSCGVGTFYSGEQQQCVQCPPGTYQDTVGQLSCEPCPSTEVQGIA
GAKNVSQCGGQCPAGHFSADGFRPCQPCPLGSYQPEPGRVLCFPCGGGLMTKYEGSVSFR
DCEAKVHCAPGHYYNSSTHRCIRCPAGTYQSEFGRNYCITCPGNTTTDFDGATNVSHCKN
QLCGGELGEYTGYIESPNYPGDYPSNVDCVWTINPPHKRRILIVVPEIFLPIEDECGDVL
VMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQ
QLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKEMFPRSFIKL
LRSKVTRFLRPYK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcttgtttttcccgggacgtttgtttgtttgtcctcctcataaatacttgc
agggtgatggggaatgtcggactcgcagatgcagacgaatgcacagagggttcagacgac
tgccacatcgacgccatctgccagaacacgcccaagtcctacaactgcatctgcaagccg
ggctacaagggagatggcaagcagtgcgaggacatggatgagtgtgagaacgactacaat
gggggctgtgtccatgaatgcatcaacatacctggcaactacaggtgcacctgctatgat
ggattcatgctggcccacgacggacacaattgtatggatgtggacgagtgtctggacaac
aacggtggatgccagcaagtgtgtgtcaacaccatggggagctacgagtgtcagtgcaca
gagggcttcttcctcagtgacaaccagcatacctgcatccaccgctctgatgatggaatg
aactgcatgaacaaggaccacggctgcgcgcacatctgcagagaggctccaggtaaaggc
ggggtttcctgcgagtgccgtcctggctttgagctggccaaaaaccagaaagactgtaca
ctgacgtgcaactatggaaacggcggttgccagcacacatgtgatgacacagacacaggg
ccagtgtgtggctgccaccagaagtatgccctgcactcagacagcaagacctgcatcgag
aaagatgaggctgcaattgagagctctgagttcaatgccacgtcagtagctgatgtggac
aagcgggtgaaacggcggctacttatggagacctgcgccgtcaacaacggcggctgcgac
aggacatgtaaagacacggccacaggggtgcgctgcagctgccccgtgggtttcaccctg
caacccgacggcaaaacctgtaaagacattgacgaatgccaggagaacaacgggggctgt
gatcacttctgcaggaacacagtgggctccttcgaatgtagctgccagaaaggccacaaa
ctgctcactgatgaacggacatgccaagacattgacgagtgctcctttgagagaacctgc
gaccacacctgcatcaactaccctggcagctttgagtgcttgtgcaacaagggatacatc
ctgtacggcctcactcactgtggagacattgatgagtgcagcatcagcaacgggagctgt
gagtatggctgcataaacaaccagggaagctacgagtgtgtgtgtccacctggacagaaa
ctccactggaacaagaaagattgcatcggtggttgtcatggtgatgtgacatatgtgtgt
tcctcagaggcggtgaagtgtctgcccaatgggaagccagcgcccagagcccagctgacc
tgcaccaagagcggtggggcagaggtctgctcgctctcctgcccctccaatgccctcttt
ctcacagactcagagaacagctacacactgagctgtggagtgcccgtccagcctagtaaa
gctcctcagaagaggaatgccaccgctgccttacccacctgtgccgacacactggccccg
cccatcaaacagaaggccaggtttaagatcaaagacgccaagtgccacctgaggccccgc
aacaaggagaaacacagagattcatccaagcagagcctgcaaggaggccagttcccctgc
accgacgactgccaggtaacatttgtcaacctcaagtgcgactcgtctaagaagcgcaga
cgaggacgcaaatctccttcgaaagaggtttcccacatcacagctgagtttgagatggag
atgaaggaggaggatgcctcagactcatgtaatgtggactgcgtgcgggagaggatgaag
cagaagctgcagagcgccatgcggacgctcaggaagtccatcaacaaacaacagttctac
atccagttttctgggacagagtatgaggtggcccagaaaccgtccagggtaccagagggt
gccgaagcctgcagcacaggacaaatcctccgagacggaaagtgtgtgagctgtggtgtg
gggacgttctacagcggggagcagcagcaatgtgtccagtgccctcccggtacttaccag
gacacggtgggtcaactgtcctgtgagccatgtcccagcactgaagtacaaggcattgct
ggtgctaagaacgtgtctcagtgtggaggtcagtgtccagcaggtcatttctctgctgac
ggcttccgtccctgccagccctgtccactgggctcctaccagccagaaccaggccgggtc
ctctgcttcccctgtggaggaggtctcatgaccaagtatgaaggatcagtctcgttcagg
gactgtgaggccaaagtgcactgtgctcctggacattactacaactccagtacccaccgc
tgtatccgctgcccagcaggaacctaccagtctgagtttgggcggaactactgcatcaca
tgcccagggaacaccaccactgactttgatggtgccaccaacgtctcccactgcaaaaac
cagctgtgtggaggtgagctgggagaatacacaggctacattgagtctcctaactaccct
ggagattacccgtccaatgtagactgtgtctggaccatcaacccaccacacaagagacgg
attctcattgtggtaccagagatcttccttcccatcgaggatgagtgtggagatgtgctg
gtcatgaggaagagtgcccttcccacctccatcaccacctatgagacgtgtcagacctat
gaacgacccatcgccttcacctctcgctctcgcaagctctggattcagtttaagtccaac
gagggcaacagtggcaaaggcttccaagttccatatgtcacctatgatgaggactaccag
cagctgatagaggacatagtgcgagatggcaggctctacgcttctgagaaccaccaggag
atactgaaggacaagaagctgataaaggccctgtttgacgtgctggcccatccccagaac
tacttcaggtacacggcacaggagtctaaagagatgttccctcgctccttcatcaagctg
ctgcgctccaaagtcaccaggttcctacggccatacaaatag
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