Siniperca chuatsi (mandarin fish): 122871926
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Entry
122871926 CDS
T08948
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122871926 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122871926 (setdb2)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122871926 (setdb2)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122871926 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122871926 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-SET
SET
MBD
Motif
Other DBs
NCBI-GeneID:
122871926
NCBI-ProteinID:
XP_044043479
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All DBs
Position
LG24:complement(1530294..1536586)
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AA seq
642 aa
AA seq
DB search
MEMEADSLDPQDVESSFSERAKSFWAEEDVDQVFNGVFESLDHLKRALKKNTATDKEYVQ
GLKLLEFLDCCPLASSQDSSVVQVVIGSGELLLPAEFSSSAPARSNGPGSAAAPPAGREE
LLPPLTPVQLQYQLHPCCKACLSSLPSMLQSTPPFWGQNPLKIPLLCGFKRLTAVPLMSS
RWDGACDAQGAEPAGSEDVEEGVEDWDVVYKAPCGQSLRNHDDVMRFLLATETYDILQVD
FFTFNASVRLDPPPSAGPRRPELDLSRGVEPTPVELCAGDGGARPAEFRYRKERWPHGCF
LSRGPTLFDACCDCTDGCADAQRCACVAMTRGGRHYSHHRLSEPVPSGVYECGPWCGCDR
ARCQNRLVQRGIRVRLQVFQTDGRGWGVRCRDDLDRGTFVCIYAGVILRRVPSPAESPPP
KLTRADLPSDDEVEVVTEWLAPPVLEGRSNLVEPPTLTSHVPVIQRPTDTAPQDRDKVQT
VLAGGLEPPSPSAGGSGDQSPAQEKKVAVTAAGPEAVAIQSLNGTETETNSQKSLKRAMK
VEDVHFLDASKEGNVSRFINHGCQPNLFTQNVFTDSHDPGFPVIAFFTNRAVKAGTELTW
NYSADAKRKQEVPCLCGSNCCQGHFTIEETVCDMCEVEGEAQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagcggactcattagatccacaagatgttgagtcgtcattttcagagcgg
gccaaaagcttctgggccgaggaagacgtggatcaggtttttaatggagtatttgagtct
ctggatcacctgaagagagccctgaagaagaacacagcgacagacaaagagtatgttcag
gggttgaagctgctggagtttctggactgctgtcctctggcctcctcacaggactcatct
gtggtccaggtggtcatcggctcaggtgagctgctgctgcccgccgagttctcttcctcc
gccccggctcgctccaacgggccgggcagcgctgcagcgccccctgctggcagagaggag
ctgctgcctcctctgacccccgtccagctgcagtaccagctgcacccctgctgcaaggcc
tgcctgtccagtttacccagcatgcttcagtccacgcctccgttctggggtcagaaccct
ctgaagatcccgctgctctgcggctttaagaggctgaccgccgtgccgctgatgtcatcg
agatgggacggggcctgtgacgctcagggggcggagcccgccgggtctgaggacgtggag
gaaggcgtggaggactgggacgtcgtttacaaagcgccgtgtggacagagcctccgtaac
cacgacgacgtgatgcgtttcctgttggccacagagacctacgacatcctgcaggtcgac
ttcttcacctttaacgcctctgttcggttggacccccccccgtcagcgggcccccggcgg
ccggagctggacctgagccggggcgtggagcccacgccggtggagctgtgtgccggggac
ggcggcgcccggcctgccgagttccgctacaggaaggagcgctggccgcacggctgcttc
ctgagccgcggcccgacgctgttcgacgcctgctgcgactgcaccgacggctgcgccgac
gcacagcgctgcgcctgcgtcgctatgaccagaggggggcgccattacagccatcacagg
ctgagcgagcctgtaccgtcaggcgtgtacgagtgtggtccgtggtgcggttgtgatcgg
gctcgctgtcagaaccggctggtccagagagggatcagagtccgcctccaggtcttccag
actgacggccgcggctggggtgttcgttgccgtgacgacttggaccgcggcacgttcgtg
tgcatatacgcaggtgtgatcctgcggagggtcccgagtccggccgagtctcctcccccg
aagctgacgagggcggacctcccctcagacgacgaggtggaggtcgtcactgagtggctg
gccccgccggtgctggaggggcggagcaacctggtggaaccgcccacactcacctcgcac
gtcccggtgatccagagacccaccgacaccgcaccgcaagacagagacaaggttcagacg
gtgttggcgggaggtctggagcccccgtctccttcagcaggtgggtcaggtgaccagtct
cccgctcaggagaagaaggttgccgtgacagcggccggtcctgaggcggtggcgatccaa
agcctgaacggtacggagacggagacaaacagccagaagagtttaaagagagcgatgaag
gtggaggacgttcacttcctggacgccagcaaggaggggaacgtgagccgcttcattaac
cacggttgccagccaaacctgttcacccagaacgtcttcaccgactcccacgaccccggc
ttccccgtcatcgccttcttcaccaacagggctgtgaaggccggcaccgagctcacctgg
aattactccgccgacgcaaaaaggaaacaggaagtgccctgtctctgcggcagcaactgt
tgccaagggcattttaccatcgaggaaaccgtgtgtgacatgtgcgaggttgaaggtgaa
gcccagtaa
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integrated database retrieval system
