Siniperca chuatsi (mandarin fish): 122872406
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Entry
122872406 CDS
T08948
Symbol
si:ch211-246m6.5
Name
(RefSeq) LOW QUALITY PROTEIN: von Willebrand factor D and EGF domain-containing protein
Organism
schu
Siniperca chuatsi (mandarin fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_2
VWD
EGF
EGF_CA
hEGF
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
122872406
NCBI-ProteinID:
XP_044044535
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All DBs
Position
LG24:complement(3565044..3596888)
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AA seq
2099 aa
AA seq
DB search
MDCCAFGSVRLLFPGYLRIAVLCVVQLGAFAQNAPECYPGGHRTLRNPHRSVDFDSTEIQ
NKAIQDLICDHSLLPGWYRFRINNKPAEMPTTCVEMNRCGTQAPVWLSLKDASLPRPGEV
RQLSACATWQFFHGSAKDCCLFRIPIMVRNCGEFLLYHLQPTQGCMGYCAKVSSDVGPIL
CPPGEVEVNGRCKAALPSLPSRPAIXPELIGHSVHLRCSFIPPPWSQTLGFQVVWARHIG
HSMKVEIRQESTLKPFSVVEMDGVHFRLGETFSCSVSTFRANSSHSRSTPKESEGFYAGL
KFSPDLLHIAENSKEHEVAVHSTVPIPCYGPDHGHQCGVPLALSVHDPDSLGHEAANVAL
SACQVELQPNACSDGSCGRATFVITAVTDFTRDGNRPSLIGVLPGPSAPRLWRSYVPTSL
KVTVQDVPTSICYSLTDPHVITLDGRHYENHQTGTFVLYRSLVREFEVHSRQWDCGSRHY
AVACNCGVAAREGDEIAVFDMCNGQPQETRPQLTLKNLGDREGSRVRVLESHQGKKVTLI
FPSGAFVRADVGDWGMSLSVRVPSVDYSNTQGLCGTFDRNGNNDFHGSDGGSYGPDELHR
FIEDWRIAPGESLFDKTPLGTTQEVRRPFCQCQKGYSTSHHASREMRNLYNPSAHSDCIA
YDNVDYTSVFPSMDTTVEYIKSPEREESNLDMSAFNSHPKKRHLWFHSENNENSDGDLQL
DSEFREDLLLSVDRPRRQASFEFQPVFTAQSLSQADLENFAYFFPEDHLAEARPELQPQW
PTPSGLTSAKALEVCQIALANSTVGTVCRGLLGRRLDEAVDLCILDLQLKDDLGWEEALL
PYLENECERRLLENRTQRALEVAGQPGAFREVVTALRCPNFCNGNGECTEWGCQCYQSHS
FYDCSLAISQPVELTDLENGGLCDIRAFNCRNIRVFGLGFIDSPDLSCHATRLKYMNGVW
VPGEKQRTKATFLSSKALDCAVPSLSNTAVNTEDFMMDDKPYARWEIKVTNDASQYSQAK
VLTIYDGVCQVCEASRSGLCKLKERTCNIDGMCFTAGDSNPSSPCLLCDPDASKFTWSVN
QVNEPPAFHQPQSDLRTFAGENFVFQFAASDPEGSALLFQLEEGPKGAVLSPAGLLIWRV
PEEEGRQSSHSLRVTLSDECNAQSTFIVEIDVVPCGCQNGGTCVTDVNFPAGSGKYLCVC
PEDKQGDLCNEDVDECLSAPCTVGKCINTASGYRCECPKGLRGVTCLEDINECERKPCFP
GVQCFNSFGSYGCGPCPKGMLGNGTTCTVVRPVPISPTSAPRTTVYKIPDVLLQPPKIKT
DTFRKTSSSSSPQTRAEAGKIIPRVAPNRSQTKTTTWRRIPGTSQNPALTQAETNESIAA
ITPVESQTKTHALRKTQGLNLNPSTTNTDTFKNVSGITPDQVKPDQPQISSTIAKTSTVA
KPSGSGRPASGSAQSLAVNVSATCASRPCFPGVQCINRRPPHVGYVCGRCPPGLYGNGRI
CMKNAKAASNHLPQQTVGKTSRSPHGSSSKVSQLHVPNLPARHGIKHLSLSVTRANRDNA
QRQVPPSGRGGGTGRREAVTVAARDVPRTSISSLHVTHITRQRANLRSDARTYARSSMTI
SRDFTVPHVTVSKQSEGALTGAIPSKVTLSAPHLSTESGKVMQSKQTTQPQLKHLASTQA
KPWTPARPALPLTAALTALSYSLSESEFSADGDEAEPGSEGPEMQHMVPAVTFTTPGKEV
YSSPLQRATSIQPGVRSGTTAIKHVTTCTDRPCFPGVLCESAVDGGFRCGRCPVGYTGDG
RACRAVCRHTCGRNMECAAPNTCRCKPGYTGFDCQTAICEPDCMHGGVCIAPGVCHCLRG
FHGETCQEALCRLPCENGGTCVGLQTCSCPYGFVGPRCETMVCSRHCHNGGQCVSPDECM
CLPGWTGPSCETALCSPVCLNGGSCVRPNICECPHGFYGAQCQNAVCSPPCKNSGLCIRN
NVCSCLQGYTGKQCEKSVCEPMCMNGGRCVGPDVCDCPSGWRGKRCDKPSCLHKCLNGGE
CVGANTCHCAPGWQGMLCQIPHCEQKCLYGSRCVRPNVCACRSGYSGSLCSRRLPIAKG
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atggactgttgcgcatttggttcggtgcgcctgttgttccctggatatttacgcatcgca
gtgctgtgcgtcgtgcaattaggagcgttcgcgcaaaatgctccagagtgttacccagga
ggccaccggactttgcgtaatccacatcgcagtgtcgacttcgactccacagagatccag
aacaaggccatccaggacctgatctgtgaccactccctgttgccgggctggtacagattc
aggatcaacaacaaaccagcagagatgccgaccacctgcgttgagatgaatcgctgtggt
acacaggctccagtgtggctgtccctgaaggacgcctccctgccgcggcccggcgaggtc
cgccagctctctgcctgcgccacctggcagttcttccacggtagcgccaaggactgctgc
ctcttccgcatccccatcatggtgcggaactgcggcgagttcctgctgtaccatctgcag
cccacacaggggtgcatgggatactgtgctaaagtttcttcagatgtgggacccatactc
tgcccaccaggtgaggtagaggtcaacggccgatgcaaagctgcccttccgtccctgccg
tcccggccggcgatcntcccggagctcatcggccacagcgtccacctgaggtgctccttc
atcccgccgccgtggagccagacactgggcttccaggtggtttgggccagacacatcggc
cacagcatgaaggttgagatcaggcaggaatccacactgaaacccttctctgtggtggag
atggatggcgttcacttcaggctcggagaaacgttctcctgcagtgtgtcaactttcaga
gccaactccagccacagcagatctactccaaaagaaagtgagggtttctacgctggactg
aagttttctccagacttgctccacatagcagagaacagtaaggagcacgaggtggccgtc
cacagcacagtgcccatcccctgctacggccccgaccacggtcaccagtgtggagtccct
ctggctctgagcgtccacgacccagatagtctcggacacgaggctgcaaatgtggcgctg
tccgcctgccaggtggagctccagcctaacgcctgcagtgacggcagctgcggccgggca
acttttgttatcactgctgtcactgatttcacacgagatgggaaccggccaagtctgatc
ggtgttttgccaggacccagcgcaccacgactctggagaagttacgtcccaacatccctg
aaagtcacagtccaggacgttcctacttccatctgctactctctgactgacccacatgtc
attaccctggatggcagacattatgaaaaccaccagactggcacctttgtcctttaccgg
agcctcgtcagggagtttgaggtccactctcgccagtgggactgtggcagccgacactac
gctgtcgcctgcaactgcggcgttgcggcgcgagagggggacgagattgctgtctttgac
atgtgcaatggccagccacaggaaaccaggccacagcttaccctgaagaacctaggtgac
agggagggcagtcgagtcagagtgctggagtcccaccaggggaagaaggtcaccttgatc
tttccctccggggcctttgttagggccgatgttggggattgggggatgagcctgtccgtc
cgggtgcccagcgtggactacagcaacacacaaggcctctgtggcaccttcgaccgcaat
ggcaacaacgacttccacggctctgatggtggctcctatggccccgatgagctgcatcgc
ttcatagaggactggagaatagctcccggtgagagtttatttgacaagacaccacttggg
acgacgcaggaggtcaggaggcctttctgtcagtgccaaaaaggatacagcacttctcat
cacgctagcagagagatgaggaacttgtacaatccttccgcccactccgactgcatagca
tacgataatgtggattacacatctgtgttcccctctatggacacaacagtggaatacatc
aagagtccagaaagagaggaaagcaacttggatatgtctgcctttaacagtcatccgaag
aagaggcacctttggtttcacagcgagaataatgaaaacagtgacggtgatcttcaactg
gacagtgagttcagggaagatcttctgctttccgttgacagaccacggagacaggcatca
tttgaattccagcctgtcttcactgctcagagcctcagccaggccgatctagagaacttt
gcctacttcttccctgaggatcacttggcagaagcccgaccggagttgcaacctcagtgg
cccacgccaagcggcctgacctcggccaaagctctggaggtgtgccagatagctctggcc
aactccactgttggtacagtgtgccgggggctgctgggacgccgcctggatgaggcagtg
gatctctgtattctggatctgcagctcaaagacgacctgggctgggaggaggcattgctg
ccatacctggagaatgagtgtgagaggaggctgttggaaaaccggacccagagagccttg
gaggtggctggtcaaccaggagcgttcagggaggtggtgacagcactgcgctgccccaac
ttttgcaacggaaatggagagtgtacagagtggggctgccagtgctatcaaagccacagc
ttttacgactgcagccttgccatcagccagccagtagagttaacagatttggagaacggt
ggactgtgtgacatccgagctttcaactgtcgcaacattcgagtctttggcctaggcttc
atcgactcccccgacctcagctgccatgccaccagactgaagtacatgaatggagtttgg
gttccaggggaaaaacagagaacaaaagccaccttcctcagttcgaaggctttagactgt
gctgtaccatctctgagcaacacagccgtcaatacagaagacttcatgatggatgacaaa
ccatacgcacgctgggagattaaagtaaccaatgatgcctcccagtacagccaggccaag
gtgctgacaatctacgatggcgtttgccaggtctgcgaggcatcgcgctcaggactttgt
aagttaaaggagaggacatgtaacatcgacgggatgtgtttcacagcgggagactccaat
cccagcagcccttgcctcctctgtgacccggacgcctccaaattcacctggtccgtgaac
caagtcaacgagccgccggccttccaccaacctcaaagcgacctgcggacatttgccggg
gagaacttcgtcttccagttcgcggcatcagaccccgagggctcggcactcctcttccag
ctggaggaggggccaaagggggctgtcctctcccccgctggcctccttatctggagggtt
cctgaggaggagggacgtcaatcgagccactccttacgcgtcacgctgtcagacgagtgc
aacgcccagagcaccttcatcgtggagattgatgtggtgccgtgtgggtgtcagaatgga
ggtacatgtgtgacggacgtcaatttccctgctggcagtgggaagtatctgtgtgtatgt
cctgaggataagcagggtgacctctgcaacgaggatgtagatgaatgtttgtcagcccca
tgcacagtcggcaagtgcataaacacagccagtggctacagatgcgagtgtcctaaaggg
ctgagaggtgtaacatgcttggaagatatcaatgagtgtgaaaggaagccttgtttccca
ggagtccagtgcttcaacagctttggctcctatggctgtggcccatgccccaaaggcatg
ctgggaaatggaacgacttgtacagttgtcaggccagtccccatctctcccacatctgct
cctcgtacaactgtctacaagataccagatgttctgctgcaaccacccaaaataaagaca
gacactttccggaagacctcaagtagtagctccccgcagacgagggctgaggcgggaaag
ataattccaagggttgccccaaaccgatcacaaactaagaccaccacttggagacggatt
ccaggaacaagccagaacccagcgctcactcaggcagaaactaacgagagcatcgcagca
atcacaccagtcgagtcccaaacaaagactcatgctttgagaaaaactcaaggacttaac
cttaacccatccacgaccaacactgacacgttcaagaacgtctcaggaattacgccagac
caagtcaagcctgatcagccccaaatcagcagcactattgccaagacatccactgtagcc
aaaccatcaggaagtggcagaccagcttcaggatctgctcagtctctggctgtgaatgtg
tcggctacgtgtgccagcaggccctgcttccccggggttcaatgcatcaaccgcaggccg
ccacatgtcggctatgtctgcggccgctgcccgcccggcctttatggcaacggacgcatc
tgcatgaagaacgccaaggcagcatccaatcaccttcctcagcagacggtaggaaagacc
agccgttcccctcacggaagcagcagcaaagtctcccagctccacgtgcccaacctgccc
gccaggcacggtatcaaacacctgtccttgtctgtcaccagagcaaaccgagataatgca
caacgccaggttcccccttcagggaggggaggcgggacggggaggagagaggcggtcact
gttgctgcaagagatgttcccagaacatcaatcagctccctccatgtcactcacatcacc
cgccagagggccaacctcagatctgatgccaggacatatgccagatctagcatgactatc
tccagggattttacggttccccatgtcacggtctccaagcagtctgaaggagcactgact
ggtgccataccttccaaggtaacactgtccgctccacacctatccactgagtctggcaaa
gtgatgcagtccaaacagacaacccagccccagctcaaacacctggcgtccacccaggcc
aaaccctggacccctgcaagacccgctctcccacttacagcggccctaactgctctgtcc
tactcgctgtctgagtcagagttctctgcagacggagatgaggctgagcctggatctgaa
ggcccagagatgcaacacatggtcccggcagtgaccttcacaacgccgggcaaggaggtc
tacagctccccgctacaaagagctacctccatccagccaggggttaggagtggtacgaca
gccatcaaacatgtgacgacctgcaccgaccggccgtgttttcccggagtcctgtgtgaa
tcagccgtggatgggggtttccgctgtgggaggtgtcctgtaggatacactggagatgga
cgagcctgtcgagctgtttgcaggcatacgtgtggtaggaacatggagtgtgctgcaccc
aacacatgccgctgcaaaccaggctacactggattcgactgtcagacagcaatctgtgag
ccggactgtatgcacgggggtgtttgcattgctccgggtgtgtgtcactgtctcagaggt
tttcatggagaaacctgtcaggaagctctatgcaggttaccgtgtgaaaatggaggcacc
tgtgtgggactgcagacttgttcctgcccttatggatttgttggacctcgatgtgagacc
atggtgtgtagccgtcactgccacaatggaggccagtgtgtgtctccagacgagtgcatg
tgtctgccaggctggaccggaccgtcctgtgagactgctctctgctctcccgtgtgtctg
aacggaggttcgtgtgttcggccgaacatttgcgagtgtcctcacggtttctacggtgca
cagtgtcagaatgctgtctgcagtcctccctgtaagaacagcggcctttgtataaggaac
aacgtctgctcctgtctgcagggatacaccgggaagcaatgcgagaaaagtgtgtgtgag
cccatgtgtatgaacggcggcaggtgtgtcggtccagatgtttgcgattgtccgtcaggt
tggcgaggaaagagatgtgataaacccagctgtctgcacaagtgtctgaatggaggggag
tgtgtgggagccaacacctgccactgcgccccggggtggcaaggcatgctgtgtcagatc
cctcactgtgaacagaagtgtctttacggcagtcgatgtgtccgaccaaacgtctgcgcc
tgccggagcggatactcaggttctctttgctccagaaggctccctattgccaaaggttga
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