Siniperca chuatsi (mandarin fish): 122875091
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Entry
122875091 CDS
T08948
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122875091
Membrane trafficking [BR:
schu04131
]
Exocytosis
Others
Others
122875091
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122875091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Crescentin
AAA_13
DUF5798
Motif
Other DBs
NCBI-GeneID:
122875091
NCBI-ProteinID:
XP_044049791
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All DBs
Position
LG4:complement(15468215..15491023)
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AA seq
1135 aa
AA seq
DB search
MYGSARSVGRGDANHSGGRDGGGTGNQGSGRSPRLPRSPRMGHRRTNSTGGSGGGPGGAG
GKTLSMENIQSLNAAYATSGPMYLSDNEVAMAGDHIPKSGGTVTTMGRQRVTYGSRGSSS
GVVAASTPNISTSVPANAVLPAGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQL
KEVLRENEMLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVI
QDEAQHLQMTVQALQDELRIQRDLNQLLQQDPSSQGRDLALASEPTEENYRRLQAEHERQ
AKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERTRRLA
DAEMHRHHLESLLDQRDREITALREQELHRRYEGTPESTKTKALQTVIDMKDAKINSMDR
SLRDMEEELLMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMEQVKQDLSRKDTELLG
LQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRQRLEEKEATLNKKSKQ
IQEMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSL
QADTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEELDCNKKELKELKERLSLL
QGDLSDRETSLLDLKEHASSLASSGLKKDSKLKSLEIALEQKKEECLKVENQLKRAQNAA
LEAQANTELAERIKNLEQEVARHKEDSGKAQAEVDRLLEILREMENEKNDKDKKISELES
SASRQMKDQSKKVASLKHKEQVEKSRNARLMEEARKREDNMSENSQQVKDSLRQKSERIE
ELEEALRESVQITAEREMVLAQEEAARSLQEKQKHSLKPMHESNLAHFKWSKMEELLGAM
EKVKQELESMRAKLASTQQSLGEKEAHLSTLRAERRKHLEEVLEMKQEALLAAISEKDAN
IALLELSSSKKKKTQDEVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTN
HKPSPDQQMIPPLLALSQNRSKLKLYIAHLTDLCHDRDPSILSQLTPPSHYHNSDPEDLE
EELQKMSVEQLERELEVCEKESGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagtgcccgctctgttggcagaggggatgccaaccacagtggaggaagagat
ggaggtggtactggtaatcagggatctggccgttcccctcgccttccccgttctcctcgg
atgggacaccgtcgcaccaacagcactggaggcagtggagggggtcctggaggagcagga
ggcaagacgctttcaatggagaacatccagtccctcaacgctgcttatgccacctcagga
ccaatgtacctgagtgacaatgaggttgccatggcaggcgaccacattcccaaaagtggt
gggacggtgacgaccatggggagacagagggtgacatatgggtcaaggggcagcagcagt
ggagttgtggctgctagcacccccaacatctccacctcagtgcctgccaatgctgtgctg
ccagcaggcatgatggcaggtgatgctctagcatttggggaccaccacatggcctccact
gtgccccattctctaaggcaggccagagacaacaccatacttgatctgcaggcccagctg
aaagaggtcctgcgcgagaatgaaatgctgcggcgagaagtggaagttaaggagagcaag
ctcagttcctccatgaattctatcaagaccttctggagcccagaattaaaaaaggagcga
gctctcaggaaagatgaggtttctaagatcactgtctggaaggaacaataccgtgtgatt
caagatgaagcacagcatctccagatgactgttcaggctcttcaggatgagctgaggatc
cagagggacctaaaccagctgctccagcaagacccctccagccaaggccgggacctggcc
ctggcatctgaacccacggaggagaactaccggcggctacaggccgagcatgagagacag
gccaaagagctcttcctccttagaaagaccctggaggagatggagctgaggattgacaca
caaaagcaaaccctgggagccagggacgagtccatcaagaaacttctggagatgctgcag
agcaaagggccgtctgccaaggcatcagaagaggaccaggagcggaccaggagactggct
gatgcagagatgcacaggcatcaccttgagagtttactggaccagagagacagagagatt
actgcactaagagagcaggagctgcaccgccgctatgagggaacccctgagtccaccaaa
actaaggctctacagacggtcatcgacatgaaggatgcaaaaatcaattcaatggaccgg
agcctgagagacatggaggaggagctgctaatgctgaaatccaatggacttctgagctgc
gaggagcgtcaggaggagatgaagcagatggaggtctatcgcagccacaccaagttcatg
aagaacaagatggagcaggtaaagcaggatctctccaggaaggacactgagctgcttggt
ttgcagaccaagctggagacgctcaccaaccagttctcagatagcaagcagcacattgaa
gtcctcaaggagtccctcactgctaaggagcagcgagctgccatcttacagacagaggtg
gatgcattgcgccagcgcttggaagagaaggaggcaactctgaataagaagagcaagcag
atacaagaaatgtcagaagagaagggcacactcaacggggagatccacgacctcaaggac
atgctggaggttaaggagcgcaaagttaatgtgctacagaagaagattgagaacttgcag
gagcagctgagggacaaggagaagcagatgagcagcctgaaggagagagtaaagtctttg
caggcagacacttccaacactgacactgctctcaccacactggaggagtctcttgcagaa
aaggagcgcatcattgagcgtttaaaggagcagcgagacagagacgaccgggagaagaca
gaggagctcgactgcaacaagaaggaactgaaagagttgaaggagagactgagcttactg
cagggagacctgtcagacagagagacgtctctgttggacctgaaggagcatgcatcatcc
ctggcctcctcagggctgaagaaggactccaaactcaagagtctggagatcgccttggag
cagaagaaggaggagtgcctcaaagtggagaaccagcttaagagagctcaaaacgcagcc
ctggaggctcaggccaacactgagctggccgagcgcattaagaacctcgagcaggaagtg
gctcgccacaaagaggattctgggaaggcccaggctgaggtggaccgcctgctggagatc
cttcgggaaatggagaatgagaagaatgacaaggacaaaaagatcagtgagctggagagt
tcggcctccaggcagatgaaagaccagtcgaagaaggtggcatctctgaagcacaaggag
caggtggagaagagtaggaatgctcgactcatggaggaggccaggaagagggaggacaac
atgtccgagaactcccaacaggtgaaggactctctgcgtcagaaatcggagcgcatagag
gagctggaggaggccctgagagagagcgttcagatcactgctgagcgagagatggtactg
gcacaggaggaggctgccaggtcactccaggagaagcagaagcactcactcaaaccaatg
catgagtccaacctcgcccactttaagtggtctaagatggaagagctgctgggggccatg
gagaaggtgaagcaggagctggagtccatgagggccaagctggcctccacccagcagtct
ttgggtgagaaagaggcacacctctcaaccctgcgagctgagcgcaggaaacacctggag
gaggttctggagatgaagcaggaggcgctgttggctgcaatcagcgagaaggatgctaac
attgccctactggagttgtcctcctctaagaagaagaagacccaggatgaggtggctctg
ctgaagcgggagaaggacagactggtgcaacaactcaaacagcagactcagaacagaatg
aaactgatggcggacaactatgaggatgaccatctgaagactgcccctgaccagacaaat
cacaaaccctctccagatcagcagatgataccccctcttctagccctgtcccagaaccgc
agtaagctcaagctctacatcgcccacctgacagacctctgccatgaccgggaccccagc
atcctcagccagctcacgccgccctctcactaccacaacagcgaccccgaagacttggag
gaggagctccagaagatgagtgtcgaacagttggagcgggagctggaggtgtgtgagaag
gagagcggagagctgcaggagtacgccaactctgttctccagcagatcgcagactactgc
cctgatatcctggagcaggttgtcaatgccttggaggagtcatgctga
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