Siniperca chuatsi (mandarin fish): 122877216
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Entry
122877216 CDS
T08948
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03420
Nucleotide excision repair
schu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122877216 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
122877216 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
schu03051
]
122877216 (rad23ab)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122877216 (rad23ab)
Proteasome [BR:
schu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122877216 (rad23ab)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122877216 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
Crinkler
UBA_3
Rad60-SLD_2
DUF1421
Ubiquitin_2
Dsc3_N
UBA_2
CUE
Motif
Other DBs
NCBI-GeneID:
122877216
NCBI-ProteinID:
XP_044054388
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All DBs
Position
LG6:complement(30836118..30849766)
Genome browser
AA seq
487 aa
AA seq
DB search
MLTITMKTLQQQTFKIEIDPELTVEALKEKIEEDRGKDAFPAAGQKLIYAGKILNDDTPL
KDYKIDEKNFVVVMVTKPKPAPTPQVAPQPTPQPAAAPAPPSASGPAPASGPAPASGPAP
ASGPTQVLSTPTHTVSAPTPVPQSVPLSETPPPVPENTPPASVEATAALDSNTAPDSASA
VTLASDPAPAPAPAPAPEAVQTVPASAPADRPTPAAQPEEKPREDPENQPSATAPVHSSA
SSLVDELGLLEEAASILVTGPAYENLVSEIMSMGYERDQVVAALRASYNNPDRAVEYLLM
GIPAEASDLPPQEPVRHSAPSNPPTSTTEQPQQPPADSNTGPVSGSQPPPAGGGSVSTGN
PLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPQGG
DMGGEGAEAQGSPHTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL
QQTWDDE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacaatgaagaccctccagcagcagacgttcaaaatagaaatagaccca
gaattgacggtggaagccctgaaggagaaaatagaggaggacagaggaaaagatgcattt
cctgctgcaggacaaaaactcatctatgcaggcaaaatcttaaatgatgacaccccgctg
aaagactacaaaatcgatgagaaaaactttgtggtggtcatggttacgaagcctaaacca
gcccctactccacaagtagcccctcagccaactccccaaccagctgcagctccagcacct
ccctcagcctctggcccagcaccggcctctggcccagcaccagcctctggcccagcaccg
gcctctggcccaacacaagttctctccacaccgacacatacagtgtctgcacccacacct
gtcccacagtcagtgcctctctctgaaaccccgcctccagtcccagaaaacaccccgccg
gcttctgttgaagcaacagcggctctggactcaaacacagccccagactcggcttcagcc
gttactctagcctctgacccagctccagctccagctccagctccagctcctgaagctgtt
cagacagtcccggcctctgcccctgcagaccgccccacccctgctgcccagccagaagag
aagccaagggaagaccctgagaatcaaccatctgccactgcaccagttcactcctctgct
tccagccttgtcgatgaactaggacttcttgaagaagcagcgtcaatactggtgacaggt
ccagcctatgagaacctagtttcagagattatgtctatgggttatgagcgggaccaggta
gtcgctgcactcagagccagttacaacaacccagaccgagcagtggagtatctactcatg
ggtattccagcagaggccagtgatctgccgcctcaggagccagttagacacagtgctcca
tccaacccccccacctctactacagaacaaccacagcagcccccagcagactcaaacaca
gggccagtgtctggcagccagcctccccctgctggaggaggctctgtctccacagggaac
cctctggagttcctgaggaaccagcctcagttccagcagatgagacagatcatccagcag
aacccagccctcctgccagcccttctgcagcagctgggcagagacaacccgcagctgctg
cagcaaatcacgcagcaccaggagcgttttgtgcagatgctgaatgagccacaaggtgga
gacatgggaggggagggggctgaggcccaggggtcaccacacaccaactacatacaggtc
accccacaggagaaggaggccattgagaggttaaaagcgctgggcttccctgaaggctta
gtcatccaggcttacttcgcctgcgagaagaatgagaatctggccgctaacttcctgcta
cagcaaacatgggatgatgagtaa
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