Siniperca chuatsi (mandarin fish): 122877333
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Entry
122877333 CDS
T08948
Symbol
clocka
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122877333 (clocka)
03036 Chromosome and associated proteins [BR:
schu03036
]
122877333 (clocka)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122877333 (clocka)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122877333 (clocka)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122877333 (clocka)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
122877333
NCBI-ProteinID:
XP_044054681
LinkDB
All DBs
Position
LG6:23447098..23478946
Genome browser
AA seq
896 aa
AA seq
DB search
MTSSIDRDDSSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYASESVTSLLEHLPSDLVDQNLLNFLPMGEHSDVYKALSSHIMEGETLTPEYLKTKN
QLEFCCHMLRGTIDPKEPPVYEYVKFIGNFKSLNNVPNCTRNGFEGVIQRSLHSAFEDRV
CLIATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEESQPEITADKQSQDSGSESQLNTSSLKEALERFNRSR
TPSASSRSSRKSSHTAVSEPASSQMKLQGDRSTPGRQSVSAVEMTSQRRSSISSQQSMSS
QNTGQNMAPSMVSQQQQQQQQQQQPQQQQQVQTSQSMVQFCSQLEAMQNLKEQLEQRTRM
IETNIQRQQDELRQIQDELQRVQGQSLQMFLQKGAGGLNLSSVQMAQGNAVQHGGTLSMQ
GQVVSAGALQNSIQQQHAVQSHSQQQTLLREQSTALSQSQRSSLTLQPQQNPLSASLYNT
MMIPQQSPSNMVQIATSLAQNTGPNTPAVATFAQDRAAQIRFPAGPQLLTKLVTGQMACG
AVMVPTTMFMGQVVTAFAPQQGQTQTISISQQPPQQQQQQQEQQVQQQSQVTAMQPGQAP
LAQQQTQFLQAPRLLHGNQSTQLILQAAFPLQQQGTFTATTQQQQQQLQQQQQLQQQQQL
QQQQQLQQQQQLQQQQQLQQQQQHQQQQQKQLQQQKQQLASHRADSLSDRSATQPQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgagcattgaccgggatgacagcagtatctttgatgggttaatggaagaagat
gaaaaggacaaagcaaaacgtgtgtcccgtaacaagtctgagaagaaacgcagagaccag
ttcaatgtccttatcaaggagctgggtaccatgttgccgggcaacacccggaagatggac
aagtccactattttgcagaagagcatcgactttcttcacaaacataaggaaatcgctgct
cagtcagagtcaactgaaatcagacaagactggaagcctccttttcttagtaatgaagag
ttcactcagctgatgttggaggcgttggatggatttttccttgcgattatgactgatggg
aatataatctacgcctctgagagtgtgacgtccctactagaacacttaccttctgatctt
gtggatcagaacctgttgaacttcctgcccatgggggagcattcagatgtgtacaaggct
ctgtcctctcatatcatggaaggagagacactgacgcccgaatatctgaaaacaaaaaat
cagctagagttctgttgccacatgcttcgaggcacgatcgaccccaaagagccccctgtg
tacgaatatgtcaagttcattggaaacttcaagtccctgaataatgtgcctaactgtact
cgcaatggttttgaaggagttatccagcgatcgcttcactctgcctttgaagacagagtg
tgtctcatagcaactgtgagacttgccaaaccacagtttatcaaggagatgtgcactgta
gaagagcctaatgaggaattcacctccagacatagtttagagtggaaatttctcttcttg
gaccacagagctccacccatcataggttacctcccgtttgaggtcctgggtacatcagga
tatgactactaccatgtagatgacttggagacactggccaaatgccatgaacacttaatg
cagtatggcaaaggaaagtcctgctactacagattcctcaccaaagggcagcagtggatt
tggcttcagacccactactacatcacctaccaccagtggaactccagaccagagtttatt
gtctgcacacacactgttgtaagttatgctgaagtaagagcagaacagcgcagagagctt
ggaattgaagaatcacaacctgagatcacagcagacaagcagtcccaggattcaggctcc
gagtcccagctcaacacttccagcctgaaggaggctctagagcgcttcaaccgcagccgg
acaccctcggcctcgtctcgcagctcacgcaaatcctcgcacaccgccgtgtctgaacca
gcgtcatcacagatgaagcttcagggagataggagtacaccaggtcggcagtccgtttct
gccgtggagatgacatcacaacgaagatcatctatcagcagtcagcagtcgatgagctcc
caaaacacaggacagaacatggcaccatccatggtttcacaacaacaacaacaacaacag
cagcaacagcagccccaacagcaacaacaagttcagaccagccaatcaatggtgcagttc
tgcagtcagctagaagccatgcaaaatctgaaagagcagctggagcagaggaccaggatg
attgagaccaacattcagcggcagcaggatgagctgcggcagatccaagatgagctgcag
agagtgcagggacagagcctgcagatgttcttgcagaaaggagctggaggactaaatctc
agctctgttcagatggcccaggggaacgctgtgcagcatgggggaacgctcagcatgcag
ggtcaggtggtctctgcaggggctctacagaacagcatacagcaacaacatgctgttcag
tcccattcccagcaacaaacactgctacgggaacagagcacagcactctcacagtctcag
cggtcgtcactcactctgcagcctcaacaaaatccactgtctgcatctctctacaacaca
atgatgatccctcagcaaagcccttctaacatggtccagattgccactagcctggctcag
aatactggtcccaacactcctgctgtggctacatttgctcaggaccgtgcggctcagatt
aggtttcctgctggtcctcagctgctcaccaagctagtgacaggacagatggcatgtggg
gcagtcatggtccccacaaccatgtttatgggccaagtggtgacggccttcgctcctcag
cagggccagacccagaccatcagcatttcccagcagccaccacagcaacagcagcagcag
caggagcagcaggtacagcaacaatcacaggtcacagccatgcagccagggcaggctccg
ctggcccagcagcaaacacagttcctacaggctcctcggcttcttcatggaaaccagtcc
acccagttgattctgcaggcagcgttccctttgcagcagcagggtaccttcactgccaca
acccaacaacagcagcaacagttacaacagcagcaacagttacaacagcagcaacagtta
caacagcagcaacagttacaacagcagcaacagttacaacagcaacagcagttacaacaa
cagcaacaacatcagcaacaacagcagaagcagttacaacagcagaaacagcaactggcc
tctcacagggcagatagtttgtcagatcgctctgctacgcagccacagtag
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